Evidence map›Paper›PMID 26389740›Full record

ArticleNature structural & molecular biology2015

Synaptotagmin-1 binds to PIP(2)-containing membrane but not to SNAREs at physiological ionic strength.

Yongsoo Park, Jong Bae Seo, Alicia Fraind, Angel Pérez-Lara, Halenur Yavuz, Kyungreem Han, Seung-Ryoung Jung, Iman Kattan, Peter Jomo Walla, MooYoung Choi and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 129 citations in OpenAlex.

  1. Article
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  5. CaScience advances · 2025
    Article
  6. A lever hypothesis for Synaptotagmin-1 action in neurotransmitter release.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Article
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  11. Article
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  14. Mechanisms of SNARE proteins in membrane fusion.Nature reviews. Molecular cell biology · 2024
    Review
  15. Article
  16. Article
  17. Review
  18. The juxtamembrane linker of synaptotagmin 1 regulates CabioRxiv : the preprint server for biology · 2023
    Article
  19. Expanding Phenotype ofMolecular syndromology · 2023
    Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Yongsoo ParkDepartment of Neurobiology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.ORCID http://orcid.org/0000-0001-8336-8051
Jong Bae SeoDepartment of Physiology and Biophysics, University of Washington, Seattle, Washington, USA.
Alicia FraindDepartment of Chemistry, Center for Membrane Biology, University of Virginia, Charlottesville, Virginia, USA.
Angel Pérez-LaraDepartment of Neurobiology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.
Halenur YavuzDepartment of Neurobiology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.
Kyungreem HanDepartment of Physics and Astronomy, Center for Theoretical Physics, Seoul National University, Seoul, Republic of Korea.
Seung-Ryoung JungDepartment of Physiology and Biophysics, University of Washington, Seattle, Washington, USA.
Iman KattanBiomolecular Spectroscopy and Single-Molecule Detection Research Group, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Peter Jomo WallaBiomolecular Spectroscopy and Single-Molecule Detection Research Group, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
MooYoung ChoiDepartment of Physics and Astronomy, Center for Theoretical Physics, Seoul National University, Seoul, Republic of Korea.
David S CafisoDepartment of Chemistry, Center for Membrane Biology, University of Virginia, Charlottesville, Virginia, USA.
Duk-Su KohDepartment of Physiology and Biophysics, University of Washington, Seattle, Washington, USA.
Reinhard JahnDepartment of Neurobiology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.
Max Planck Institute for Biophysical Chemistry · DEUniversity of Washington · USSeoul National University · KRUniversity of Virginia · US

Funding

Structural Dynamics of the Exocytotic Fusion Machine in Neurons.P01GM072694 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI KIESSLING, VOLKER · 2005 to 2021
$17.4M
Trafficking mechanisms for secretory vesicles in pancreatic duct epithelial cellsR01DK080840 · NIDDK · UNIVERSITY OF WASHINGTON · PI KOH, DUK-SU · 2011 to 2015
$1.6M
NIDDK NIH HHS DK080840NIDDK NIH HHS R01 DK080840NIGMS NIH HHS 2 P01 GM072694NIGMS NIH HHS P01 GM072694
6 · The paper itself

Abstract

The Ca(2+) sensor synaptotagmin-1 is thought to trigger membrane fusion by binding to acidic membrane lipids and SNARE proteins. Previous work has shown that binding is mediated by electrostatic interactions that are sensitive to the ionic environment. However, the influence of divalent or polyvalent ions, at physiological concentrations, on synaptotagmin's binding to membranes or SNAREs has not been explored. Here we show that binding of rat synaptotagmin-1 to membranes containing phosphatidylinositol 4,5-bisphosphate (PIP2) is regulated by charge shielding caused by the presence of divalent cations. Surprisingly, polyvalent ions such as ATP and Mg(2+) completely abrogate synaptotagmin-1 binding to SNAREs regardless of the presence of Ca(2+). Altogether, our data indicate that at physiological ion concentrations Ca(2+)-dependent synaptotagmin-1 binding is confined to PIP2-containing membrane patches in the plasma membrane, suggesting that membrane interaction of synaptotagmin-1 rather than SNARE binding triggers exocytosis of vesicles.

Indexed as

Models, MolecularAnimalsCalciumCations, DivalentCell MembraneChromaffin GranulesChromatography, Ion ExchangeExocytosisFluorescence PolarizationFluorescence Resonance Energy TransferModels, TheoreticalPatch-Clamp TechniquesPhosphatidylinositol 4,5-DiphosphateProtein ConformationRatsSNARE ProteinsCalciumCations, DivalentPhosphatidylinositol 4,5-DiphosphateSNARE ProteinsSynaptotagmin ISyt1 protein, rat

Identifiers

PMID26389740
PMCPMC4596797
OpenAlexW2233262349

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.