Evidence map›Paper›PMID 26388025›Full record

ArticleMedical science monitor : international medical journal of experimental and clinical research2015

Variation in DNA Base Excision Repair Genes in Fuchs Endothelial Corneal Dystrophy.

Katarzyna A Wójcik, Ewelina Synowiec, Piotr Polakowski, Janusz Błasiak, Jerzy Szaflik, Jacek P Szaflik

Open access · hybridAbstract read
In one paragraph

Article in Medical science monitor : international medical journal of experimental and clinical research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Diseases of the corneal endothelium.Experimental eye research · 2021
    Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Katarzyna A WójcikDepartment of Molecular Genetics, University of Łódź, Łódź, Poland.
Ewelina SynowiecDepartment of Molecular Genetics, University of Łódź, Łódź, Poland.
Piotr PolakowskiDepartment of Ophthalmology, Medical University of Warsaw, Warsaw, Poland.
Janusz BłasiakDepartment of Molecular Genetics, University of Łódź, Łódź, Poland.
Jerzy SzaflikDepartment of Ophthalmology, Medical University of Warsaw, Warsaw, Poland.
Jacek P SzaflikDepartment of Ophthalmology, Medical University of Warsaw, Warszawa, Poland.
Medical University of Warsaw · PLUniversity of Łódź · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND Fuchs endothelial corneal dystrophy (FECD) is a corneal disease characterized by abnormalities in the Descemet membrane and the corneal endothelium. The etiology of this disease is poorly understood. An increased level of oxidative DNA damage reported in FECD corneas suggests a role of DNA base excision repair (BER) genes in its pathogenesis. In this work, we searched for the association between variation of the PARP-1, NEIL1, POLG, and XRCC1 genes and FECD occurrence. MATERIAL AND METHODS This study was conducted on 250 FECD patients and 353 controls using polymerase chain reaction-restriction fragment length polymorphism, high-resolution melting analysis, and the TaqMan® SNP Genotyping Assay. RESULTS We observed that the A/A genotype and the A allele of the c.1196A>G polymorphism of the XRCC1 gene were positively correlated with an increased FECD occurrence, whereas the G allele had the opposite effect. A weak association between the C/G genotype of the g.46438521G>C polymorphism of the NEIL1 gene and an increased incidence of FECD was also detected. Haplotypes of both polymorphisms of the XRCC1 were associated with FECD occurrence. No association of the c.2285T>C, c.-1370T>A and c.580C>T polymorphisms of the PARP-1, POLG and XRCC1 genes, respectively, with FECD occurrence was observed. CONCLUSIONS Our results suggest that the c.1196A>G polymorphism in the XRCC1 gene may be an independent genetic risk factor for FECD.

Indexed as

DNA RepairAdultAgedAged, 80 and overCase-Control StudiesDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA GlycosylasesDNA Polymerase gammaFemaleFuchs' Endothelial DystrophyGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansMaleDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA GlycosylasesDNA Polymerase gammaNEIL1 protein, humanPARP1 protein, humanPOLG protein, humanPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) PolymerasesX-ray Repair Cross Complementing Protein 1XRCC1 protein, human

Identifiers

PMID26388025
PMCPMC4582917
OpenAlexW2237992635

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.