Evidence map›Paper›PMID 26386957›Full record

ArticleJournal of molecular modeling2015

On the correction of calculated vibrational frequencies for the effects of the counterions - α,ω-diamine dihydrochlorides.

S M Fiuza, T M Silva, M P M Marques, L A E Batista de Carvalho, A M Amado

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular modeling, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

S M FiuzaI&D Unit "Química-Física Molecular", Department of Chemistry, Faculty of Science and Technology, University of Coimbra, P-3004-535, Coimbra, Portugal.
T M SilvaI&D Unit "Química-Física Molecular", Department of Chemistry, Faculty of Science and Technology, University of Coimbra, P-3004-535, Coimbra, Portugal.
M P M MarquesI&D Unit "Química-Física Molecular", Department of Chemistry, Faculty of Science and Technology, University of Coimbra, P-3004-535, Coimbra, Portugal.
L A E Batista de CarvalhoI&D Unit "Química-Física Molecular", Department of Chemistry, Faculty of Science and Technology, University of Coimbra, P-3004-535, Coimbra, Portugal.
A M AmadoI&D Unit "Química-Física Molecular", Department of Chemistry, Faculty of Science and Technology, University of Coimbra, P-3004-535, Coimbra, Portugal. amado.am@gmail.com.
University of Coimbra · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present work provides sets of correction factors to adjust the calculated vibrational frequencies of a series of α,ω-diamines hydrochloride salts to account for the intermolecular interactions with the counterion. The study was performed using different theory levels for predicting the vibrational data of isolated dicationic α,ω-diamines and their hydrochloride forms, with and without the explicit account of the interactions with the chloride counterions. Different sets of correction factors were determined for each theory level considering the four smallest elements for the α,ω-diamines series, while their transferability and reliability was evaluated considering the larger elements of the series. The theory level simplification was also evaluated and was found to neither compromise the vibrational frequencies estimates nor the magnitude and accuracy of the pre-defined scaling factors. This suggests that transferability of the correction factors is possible not only for different diamines but also between different levels of theory with the averaged group correction factor, ζ g (a) , being the best choice to account for the effects of the N-H · · · Cl interactions. The possibility of simplifying the theory level without compromising efficiency and accuracy is additionally of utmost importance. This computational approach can constitute a valuable tool in the future for studying the hydrochloride forms of larger and more complex diamine systems. Graphical Abstract A computational approach that may constitute a valuable tool for studying the hydrochloride forms of large and complex diamine systems. Correction factors to adjust the vibrational frequencies calculated for isolated dicationic primary diamines for the effects of the interactions with chloride counterions, without their explicit account in the calculations, are presented and evaluated for eficiency.

Indexed as

Aliphatic diaminesCounterion effectQuantum chemical calculationsVibrational frequencies

Identifiers

PMID26386957
OpenAlexW1735689587

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.