Evidence map›Paper›PMID 26386572›Full record

ArticleApoptosis : an international journal on programmed cell death2015

Apoptosis transcriptional mechanism of feline infectious peritonitis virus infected cells.

Ahmad Naqib Shuid, Nikoo Safi, Amin Haghani, Parvaneh Mehrbod, Mohd Syamsul Reza Haron, Sheau Wei Tan, Abdul Rahman Omar

Open access · bronzeAbstract read
In one paragraph

Article in Apoptosis : an international journal on programmed cell death, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  9. Review
  10. Animal Coronaviruses Induced Apoptosis.Life (Basel, Switzerland) · 2021
    Review
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ahmad Naqib ShuidInstitute of Bioscience, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia.
Nikoo SafiInstitute of Bioscience, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia.
Amin HaghaniInstitute of Bioscience, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia.
Parvaneh MehrbodInstitute of Bioscience, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia.
Mohd Syamsul Reza HaronInstitute of Bioscience, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia.
Sheau Wei TanInstitute of Bioscience, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia.
Abdul Rahman OmarInstitute of Bioscience, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia. aro@upm.edu.my.
Universiti Putra Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Apoptosis has been postulated to play an important role during feline infectious peritonitis virus (FIPV) infection; however, its mechanism is not well characterized. This study is focused on apoptosis and transcriptional profiling of FIPV-infected cells following in vitro infection of CRFK cells with FIPV 79-1146 WSU. Flow cytometry was used to determine mode of cell death in first 42 h post infection (hpi). FIPV infected cells underwent early apoptosis at 9 hpi (p < 0.05) followed by late apoptosis at 12 hpi (p < 0.05) and necrosis from 24 hpi (p < 0.05). Then, next generation sequencing was performed on 9 hpi and control uninfected cells by Illumina analyzer. An aggregate of 4546 genes (2229 down-regulated and 2317 up-regulated) from 17 cellular process, 11 molecular functions and 130 possible biological pathways were affected by FIPV. 131 genes from apoptosis cluster (80 down-regulated and 51 up-regulated) along with increase of apoptosis, p53, p38 MAPK, VEGF and chemokines/cytokines signaling pathways were probably involved in apoptosis process. Six of the de-regulated genes expression (RASSF1, BATF2, MAGEB16, PDCD5, TNFα and TRAF2) and TNFα protein concentration were analyzed by RT-qPCR and ELISA, respectively, at different time-points. Up-regulations of both pro-apoptotic (i.e. PDCD5) and anti-apoptotic (i.e. TRAF2) were detected from first hpi and continuing to deregulate during apoptosis process in the infected cells.

Indexed as

ApoptosisAnimalsCat DiseasesCatsCoronavirus, FelineCoronavirus Infectionsp38 Mitogen-Activated Protein KinasesTranscription, GeneticTumor Suppressor Protein p53p38 Mitogen-Activated Protein KinasesTumor Suppressor Protein p53ApoptosisFeline infectious peritonitis virusFlow cytometryNext generation sequencingRT-qPCRTranscriptome

Identifiers

PMID26386572
PMCPMC7088095
OpenAlexW1645502680

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.