Evidence map›Paper›PMID 26386113›Full record

ArticleAmerican journal of physiology. Heart and circulatory physiology2015

Rapid large-scale purification of myofilament proteins using a cleavable His6-tag.

Mengjie Zhang, Jody L Martin, Mohit Kumar, Ramzi J Khairallah, Pieter P de Tombe

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In one paragraph

Article in American journal of physiology. Heart and circulatory physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mengjie ZhangDepartment of Cell and Molecular Physiology, Loyola University, Chicago, Illinois.
Jody L MartinDepartment of Cell and Molecular Physiology, Loyola University, Chicago, Illinois.
Mohit KumarDepartment of Cell and Molecular Physiology, Loyola University, Chicago, Illinois.
Ramzi J KhairallahDepartment of Cell and Molecular Physiology, Loyola University, Chicago, Illinois ramzi.khairallah@live.com.
Pieter P de TombeDepartment of Cell and Molecular Physiology, Loyola University, Chicago, Illinois.
Loyola University Chicago · US

Funding

Sarcomeric Modifications and Progressive Cardiac MaladaptationP01HL062426 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI AI, XUN · 2000 to 2020
$42.4M
Frank-Starling's Law of the Heart: Cellular MechanismsR01HL075494 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DE TOMBE, PIETER P. · 2005 to 2012
$3.0M
Phosphorylation of cMyBP-C Modulates Cardiac ArrhythmiasF32HL120643 · NHLBI · LOYOLA UNIVERSITY CHICAGO · PI KHAIRALLAH, RAMZI J · 2013 to 2014
$107k
NHLBI NIH HHS F32 HL120643NHLBI NIH HHS F32-HL-120643NHLBI NIH HHS HL-62426NHLBI NIH HHS HL-75494NHLBI NIH HHS P01 HL062426
6 · The paper itself

Abstract

With the advent of high-throughput DNA sequencing, the number of identified cardiomyopathy-causing mutations has increased tremendously. As the majority of these mutations affect myofilament proteins, there is a need to understand their functional consequence on contraction. Permeabilized myofilament preparations coupled with protein exchange protocols are a common method for examining into contractile mechanics. However, producing large quantities of myofilament proteins can be time consuming and requires different approaches for each protein of interest. In the present study, we describe a unified automated method to produce troponin C, troponin T, and troponin I as well as myosin light chain 2 fused to a His6-tag followed by a tobacco etch virus (TEV) protease site. TEV protease has the advantage of a relaxed P1' cleavage site specificity, allowing for no residues left after proteolysis and preservation of the native sequence of the protein of interest. After expression in Esherichia coli, cells were lysed by sonication in imidazole-containing buffer. The His6-tagged protein was then purified using a HisTrap nickel metal affinity column, and the His6-tag was removed by His6-TEV protease digestion for 4 h at 30°C. The protease was then removed using a HisTrap column, and complex assembly was performed via column-assisted sequential desalting. This mostly automated method allows for the purification of protein in 1 day and can be adapted to most soluble proteins. It has the advantage of greatly increasing yield while reducing the time and cost of purification. Therefore, production and purification of mutant proteins can be accelerated and functional data collected in a faster, less expensive manner.

Indexed as

EndopeptidasesHistidineMyofibrilsOligopeptidesAutomationCardiac MyosinsChromatography, AffinityDextransEscherichia coliHumansMyosin Light ChainsNickelRecombinant ProteinsSepharoseTroponin CTroponin ICardiac MyosinsDextransEndopeptidasesHis-His-His-His-His-HisHistidinemyosin light chain 2Myosin Light ChainsNickelOligopeptidesRecombinant ProteinssephadexSepharoseTEV proteaseTroponin CTroponin ITroponin THis-tagprotein purificationtobacco etch virus proteasetroponin

Identifiers

PMID26386113
PMCPMC4666967
OpenAlexW2178978183

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.