Evidence map›Paper›PMID 26385963›Full record

ArticleGenes & development2015

A monoallelic-to-biallelic T-cell transcriptional switch regulates GATA3 abundance.

Chia-Jui Ku, Kim-Chew Lim, Sundeep Kalantry, Ivan Maillard, James Douglas Engel, Tomonori Hosoya

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  4. The integrative biology of genetic dominance.Biological reviews of the Cambridge Philosophical Society · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Chia-Jui KuDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA;
Kim-Chew LimDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA;
Sundeep KalantryDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA;
Ivan MaillardDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA; Division of Hematology-Oncology, Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA; Life Sciences Institute, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
James Douglas EngelDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA;
Tomonori HosoyaDepartment of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA;
University of Michigan–Ann Arbor · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
Notch Signaling in AlloimmunityR01AI091627 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI PEAR, WARREN S · 2011 to 2025
$6.0M
Initiation of Epigenetic Transcriptional RegulationDP2OD008646 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KALANTRY, SUNDEEP · 2011 to 2011
$2.3M
GATA3 regulation in transcriptional networks during hematopoietic cell developmenR01AI094642 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ENGEL, JAMES DOUGLAS · 2012 to 2016
$1.9M
NCI NIH HHS P30 CA046592NCI NIH HHS P30CA046592NIAID NIH HHS AI091627NIAID NIH HHS AI094642NIAID NIH HHS R01 AI091627NIAID NIH HHS R01 AI094642NIH HHS DP2 OD008646
6 · The paper itself

Abstract

Protein abundance must be precisely regulated throughout life, and nowhere is the stringency of this requirement more evident than during T-cell development: A twofold increase in the abundance of transcription factor GATA3 results in thymic lymphoma, while reduced GATA3 leads to diminished T-cell production. GATA3 haploinsufficiency also causes human HDR (hypoparathyroidism, deafness, and renal dysplasia) syndrome, often accompanied by immunodeficiency. Here we show that loss of one Gata3 allele leads to diminished expansion (and compromised development) of immature T cells as well as aberrant induction of myeloid transcription factor PU.1. This effect is at least in part mediated transcriptionally: We discovered that Gata3 is monoallelically expressed in a parent of origin-independent manner in hematopoietic stem cells and early T-cell progenitors. Curiously, half of the developing cells switch to biallelic Gata3 transcription abruptly at midthymopoiesis. We show that the monoallelic-to-biallelic transcriptional switch is stably maintained and therefore is not a stochastic phenomenon. This unique mechanism, if adopted by other regulatory genes, may provide new biological insights into the rather prevalent phenomenon of monoallelic expression of autosomal genes as well as into the variably penetrant pathophysiological spectrum of phenotypes observed in many human syndromes that are due to haploinsufficiency of the affected gene.

Indexed as

AllelesAnimalsBone MarrowCell ProliferationCells, CulturedGATA3 Transcription FactorGene Expression RegulationMiceProto-Oncogene ProteinsProto-Oncogene Protein Spi-1ThymocytesT-LymphocytesTrans-ActivatorsGATA3 Transcription FactorProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Trans-Activatorsbiallelic transcriptionGATA3monoallelic transcriptionT-cell development

Identifiers

PMID26385963
PMCPMC4579350
OpenAlexW2254523882

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.