Evidence map›Paper›PMID 26385637›Full record

ArticleHuman molecular genetics2015

Multi-level omics analysis in a murine model of dystrophin loss and therapeutic restoration.

Thomas C Roberts, Henrik J Johansson, Graham McClorey, Caroline Godfrey, K Emelie M Blomberg, Thibault Coursindel, Michael J Gait, C I Edvard Smith, Janne Lehtiö, Samir El Andaloussi and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 47 citations in OpenAlex.

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  10. Therapeutic approaches for Duchenne muscular dystrophy.Nature reviews. Drug discovery · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Thomas C RobertsDepartment of Physiology, Anatomy and Genetics, University of Oxford, South Parks Road, Oxford OX1 3QX, UK, Sanford Burnham Prebys Medical Discovery Institute, Development, Aging and Regeneration Program, 10901 N. Torrey Pines Road, La Jolla, CA 92037, USA.
Henrik J JohanssonDepartment of Oncology/Pathology, Cancer Proteomics Mass Spectrometry, SciLifeLab Stockholm, Karolinska Institutet, Stockholm SE-171 21, Sweden.
Graham McCloreyDepartment of Physiology, Anatomy and Genetics, University of Oxford, South Parks Road, Oxford OX1 3QX, UK.
Caroline GodfreyDepartment of Physiology, Anatomy and Genetics, University of Oxford, South Parks Road, Oxford OX1 3QX, UK.
K Emelie M BlombergDepartment of Laboratory Medicine, Karolinska Institutet, Huddinge SE-141 86, Sweden and.
Thibault CoursindelLaboratory of Molecular Biology, Medical Research Council, Francis Crick Avenue, Cambridge CB2 0QH, UK.
Michael J GaitLaboratory of Molecular Biology, Medical Research Council, Francis Crick Avenue, Cambridge CB2 0QH, UK.
C I Edvard SmithDepartment of Laboratory Medicine, Karolinska Institutet, Huddinge SE-141 86, Sweden and.
Janne LehtiöDepartment of Oncology/Pathology, Cancer Proteomics Mass Spectrometry, SciLifeLab Stockholm, Karolinska Institutet, Stockholm SE-171 21, Sweden.
Samir El AndaloussiDepartment of Physiology, Anatomy and Genetics, University of Oxford, South Parks Road, Oxford OX1 3QX, UK, Department of Laboratory Medicine, Karolinska Institutet, Huddinge SE-141 86, Sweden and.
Matthew J A WoodDepartment of Physiology, Anatomy and Genetics, University of Oxford, South Parks Road, Oxford OX1 3QX, UK, matthew.wood@dpag.ox.ac.uk.
Karolinska Institutet · SEUniversity of Oxford · GBMedical Research Council · GBMRC Laboratory of Molecular Biology · GBScience for Life Laboratory · SE

Funding

Medical Research Council G0900887Medical Research Council MC_U105178803Medical Research Council U105178803
6 · The paper itself

Abstract

Duchenne muscular dystrophy (DMD) is a classical monogenic disorder, a model disease for genomic studies and a priority candidate for regenerative medicine and gene therapy. Although the genetic cause of DMD is well known, the molecular pathogenesis of disease and the response to therapy are incompletely understood. Here, we describe analyses of protein, mRNA and microRNA expression in the tibialis anterior of the mdx mouse model of DMD. Notably, 3272 proteins were quantifiable and 525 identified as differentially expressed in mdx muscle (P < 0.01). Therapeutic restoration of dystrophin by exon skipping induced widespread shifts in protein and mRNA expression towards wild-type expression levels, whereas the miRNome was largely unaffected. Comparison analyses between datasets showed that protein and mRNA ratios were only weakly correlated (r = 0.405), and identified a multitude of differentially affected cellular pathways, upstream regulators and predicted miRNA-target interactions. This study provides fundamental new insights into gene expression and regulation in dystrophic muscle.

Indexed as

AnimalsDisease Models, AnimalDystrophinGene Expression ProfilingGenetic TherapyMaleMiceMice, Inbred mdxMicroRNAsMuscle, SkeletalMuscular Dystrophy, AnimalMuscular Dystrophy, DuchenneMutationProteomicsRNA, MessengerDystrophinMicroRNAsRNA, Messenger

Identifiers

PMID26385637
PMCPMC4634378
OpenAlexW2179800597

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.