Evidence map›Paper›PMID 26385475›Full record

ArticleAngewandte Chemie (International ed. in English)2015

Discovery of a Potent Allosteric Kinase Modulator by Combining Computational and Synthetic Methods.

Edwin Kroon, Jörg O Schulze, Evelyn Süß, Carlos J Camacho, Ricardo M Biondi, Alexander Dömling

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. The Groebke-Blackburn-Bienaymé Reaction.European journal of chemistry (Print) · 2019
    Article
  8. Article
  9. Review
  10. Artificial Macrocycles.Synlett : accounts and rapid communications in synthetic organic chemistry · 2018
    Article
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Edwin KroonUniversity of Groningen, Department of Drug Design, A. Deusinglaan 1, 9713 AV Groningen (The Netherlands) http://www.drugdesign.nl.
Jörg O SchulzeUniversitätsklinikum Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt (Germany).
Evelyn SüßUniversitätsklinikum Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt (Germany).
Carlos J CamachoUniversity of Pittsburgh, 200 Lothrop Street, Pittsburgh, PA 15261 (USA).
Ricardo M BiondiUniversitätsklinikum Frankfurt, Theodor-Stern-Kai 7, 60590 Frankfurt (Germany).
Alexander DömlingUniversity of Groningen, Department of Drug Design, A. Deusinglaan 1, 9713 AV Groningen (The Netherlands) http://www.drugdesign.nl. a.s.s.domling@rug.nl.

Funding

Real-time discovery of inhibitors among billion compounds for preview and downloadR01GM097082 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CAMACHO, CARLOS J. · 2011 to 2020
$2.5M
NIGMS NIH HHS 1R01GM097082-01NIGMS NIH HHS R01 GM097082
6 · The paper itself

Abstract

The rational design of allosteric kinase modulators is challenging but rewarding. The protein kinase PDK1, which lies at the center of the growth-factor signaling pathway, possesses an allosteric regulatory site previously validated both in vitro and in cells. ANCHOR.QUERY software was used to discover a potent allosteric PDK1 kinase modulator. Using a recently published PDK1 compound as a template, several new scaffolds that bind to the allosteric target site were generated and one example was validated. The inhibitor can be synthesized in one step by multicomponent reaction (MCR) chemistry when using the ANCHOR.QUERY approach. Our results are significant because the outlined approach allows rapid and efficient scaffold hopping from known molecules into new easily accessible and biologically active ones. Based on increasing interest in allosteric-site drug discovery, we foresee many potential applications for this approach.

Indexed as

Allosteric RegulationDrug DiscoveryHumansModels, MolecularMolecular StructureProtein Kinase InhibitorsProtein Serine-Threonine KinasesPyruvate Dehydrogenase Acetyl-Transferring KinaseSoftwarePDK1 protein, humanProtein Kinase InhibitorsProtein Serine-Threonine KinasesPyruvate Dehydrogenase Acetyl-Transferring Kinaseinhibitorskinasespharmacophoresprotein-protein interactionvirtual screening

Identifiers

PMID26385475
PMCPMC4721676

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.