Evidence map›Paper›PMID 26385350›Full record

ArticleBlood2016

AID-associated DNA repair pathways regulate malignant transformation in a murine model of BCL6-driven diffuse large B-cell lymphoma.

Xiwen Gu, Carmen J Booth, Zongzhi Liu, Matthew P Strout

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  4. Review
  5. Synthesis and Biological Evaluation of PEGylated MWOMolecules (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Xiwen GuYale Cancer Center, Section of Hematology.
Carmen J BoothSection of Comparative Medicine, and.
Zongzhi LiuDepartment of Pathology, Yale University School of Medicine, New Haven, CT.
Matthew P StroutYale Cancer Center, Section of Hematology.ORCID http://orcid.org/0000-0002-9660-3652
Yale Cancer Center · USYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Regulation and Dysregulation of Antibody DiversificationK08CA140718 · NCI · YALE UNIVERSITY · PI STROUT, MATTHEW · 2009 to 2013
$872k
NCATS NIH HHS UL1 TR001863NCI NIH HHS K08 CA140718NCI NIH HHS K08CA140718
6 · The paper itself

Abstract

Somatic hypermutation and class-switch recombination of the immunoglobulin (Ig) genes occur in germinal center (GC) B cells and are initiated through deamination of cytidine to uracil by activation-induced cytidine deaminase (AID). Resulting uracil-guanine mismatches are processed by uracil DNA glycosylase (UNG)-mediated base-excision repair and MSH2-mediated mismatch repair (MMR) to yield mutations and DNA strand lesions. Although off-target AID activity also contributes to oncogenic point mutations and chromosome translocations associated with GC and post-GC B-cell lymphomas, the role of downstream AID-associated DNA repair pathways in the pathogenesis of lymphoma is unknown. Here, we show that simultaneous deficiency of UNG and MSH2 or MSH2 alone causes genomic instability and a shorter latency to the development of BCL6-driven diffuse large B-cell lymphoma (DLBCL) in a murine model. The additional development of several BCL6-independent malignancies in these mice underscores the critical role of MMR in maintaining general genomic stability. In contrast, absence of UNG alone is highly protective and prevents the development of BCL6-driven DLBCL. We further demonstrate that clonal and nonclonal mutations arise within non-Ig AID target genes in the combined absence of UNG and MSH2 and that DNA strand lesions arise in an UNG-dependent manner but are offset by MSH2. These findings lend insight into a complex interplay whereby potentially deleterious UNG activity and general genomic instability are opposed by the protective influence of MSH2, producing a net protective effect that promotes immune diversification while simultaneously attenuating malignant transformation of GC B cells.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)AnimalsB-LymphocytesCell Transformation, NeoplasticCytidine DeaminaseDNA-Binding ProteinsDNA RepairFemaleFlow CytometryGene Expression ProfilingGerminal CenterImmunoenzyme TechniquesImmunoglobulin Class SwitchingLymphoma, Large B-Cell, DiffuseMaleMiceAICDA (Activation-Induced Cytidine Deaminase)Bcl6 protein, mouseCytidine DeaminaseDNA-Binding ProteinsMsh2 protein, mouseMutS Homolog 2 ProteinProto-Oncogene Proteins c-bcl-6RNA, MessengerUracil-DNA Glycosidase

Identifiers

PMID26385350
PMCPMC4705602
OpenAlexW2216290245

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.