Evidence map›Paper›PMID 26382878›Full record

ArticlePloS one2015

Transcriptomic Profiling Reveals Complex Molecular Regulation in Cotton Genic Male Sterile Mutant Yu98-8A.

Weiping Fang, Fu'an Zhao, Yao Sun, Deyi Xie, Li Sun, Zhenzhen Xu, Wei Zhu, Lirong Yang, Yuanming Zhao, Shuping Lv and 7 more

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Weiping FangEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Fu'an ZhaoEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Yao SunEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Deyi XieEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Li SunDepartment of Biological Sciences, Texas Tech University, Lubbock, Texas, United States of America.
Zhenzhen XuState Key Laboratory of Cotton Biology, Cotton Research Institute, Chinese Academy of Agriculture Sciences, Anyang, Henan province, 455000, R.P. China.
Wei ZhuAgronomy College, Henan Agricultural University, Zhengzhou, Henan province, 450002, R.P. China.
Lirong YangPlant Protection Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Yuanming ZhaoEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Shuping LvEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Zhongjie TangEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Lihong NieEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Wu LiEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Jianan HouEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Zhengzheng DuanEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Yuebo YuEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.
Xiaojie YangEconomic Crop Research Institute, Henan Academy of Agriculture Sciences, Zhengzhou, Henan province, 450002, R.P. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although cotton genic male sterility (GMS) plays an important role in the utilization of hybrid vigor, its precise molecular mechanism remains unclear. To characterize the molecular events of pollen abortion, transcriptome analysis, combined with histological observations, was conducted in the cotton GMS line, Yu98-8A. A total of 2,412 genes were identified as significant differentially expressed genes (DEGs) before and during the critical pollen abortion stages. Bioinformatics and biochemical analysis showed that the DEGs mainly associated with sugars and starch metabolism, oxidative phosphorylation, and plant endogenous hormones play a critical and complicated role in pollen abortion. These findings extend a better understanding of the molecular events involved in the regulation of pollen abortion in genic male sterile cotton, which may provide a foundation for further research studies on cotton heterosis breeding.

Indexed as

Gene Expression ProfilingGossypiumPhenotypeReproductionTranscriptome

Identifiers

PMID26382878
PMCPMC4575049

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.