Evidence map›Paper›PMID 26382047›Full record

ArticlePloS one2015

Identification of Bacteria Synthesizing Ribosomal RNA in Response to Uranium Addition During Biostimulation at the Rifle, CO Integrated Field Research Site.

Lora R McGuinness, Michael J Wilkins, Kenneth H Williams, Philip E Long, Lee J Kerkhof

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Lora R McGuinnessDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, United States of America.
Michael J WilkinsSchool of Earth Sciences, Ohio State University, Columbus, OH, United States of America.
Kenneth H WilliamsEarth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America.
Philip E LongEarth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America.
Lee J KerkhofDepartment of Marine and Coastal Science, Rutgers University, New Brunswick, NJ, United States of America.
Lawrence Berkeley National Laboratory · USRutgers, The State University of New Jersey · USThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding which organisms are capable of reducing uranium at historically contaminated sites provides crucial information needed to evaluate treatment options and outcomes. One approach is determination of the bacteria which directly respond to uranium addition. In this study, uranium amendments were made to groundwater samples from a site of ongoing biostimulation with acetate. The active microbes in the planktonic phase were deduced by monitoring ribosomes production via RT-PCR. The results indicated several microorganisms were synthesizing ribosomes in proportion with uranium amendment up to 2 μM. Concentrations of U (VI) >2 μM were generally found to inhibit ribosome synthesis. Two active bacteria responding to uranium addition in the field were close relatives of Desulfobacter postgateii and Geobacter bemidjiensis. Since RNA content often increases with growth rate, our findings suggest it is possible to rapidly elucidate active bacteria responding to the addition of uranium in field samples and provides a more targeted approach to stimulate specific populations to enhance radionuclide reduction in contaminated sites.

Indexed as

Biodegradation, EnvironmentalColoradoDeltaproteobacteriaGeobacterGroundwaterPhylogenyRibosomesRNA, BacterialRNA, RibosomalUraniumWater Pollutants, RadioactiveRNA, BacterialRNA, RibosomalUraniumWater Pollutants, Radioactive

Identifiers

PMID26382047
PMCPMC4575074
OpenAlexW2212005893

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.