Evidence map›Paper›PMID 26380273›Full record

ArticleBioMed research international2015

Transcriptional Pathways Associated with Skeletal Muscle Changes after Spinal Cord Injury and Treadmill Locomotor Training.

Celine Baligand, Yi-Wen Chen, Fan Ye, Sachchida Nand Pandey, San-Huei Lai, Min Liu, Krista Vandenborne

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Celine BaligandDepartment of Physiology and Functional Genomics, University of Florida, Gainesville, FL 32610, USA.
Yi-Wen ChenCenter for Genetic Medicine Research, Children's National Health System, Northwest, Washington, DC 20010, USA ; Department of Integrative Systems Biology, George Washington University, Northwest, Washington, DC 20010, USA.
Fan YeDepartment of Physical Therapy, University of Florida, Gainesville, FL 32610, USA.
Sachchida Nand PandeyCenter for Genetic Medicine Research, Children's National Health System, Northwest, Washington, DC 20010, USA.
San-Huei LaiCenter for Genetic Medicine Research, Children's National Health System, Northwest, Washington, DC 20010, USA.
Min LiuDepartment of Physical Therapy, University of Florida, Gainesville, FL 32610, USA.
Krista VandenborneDepartment of Physical Therapy, University of Florida, Gainesville, FL 32610, USA.
University of Florida · USChildren's National · US

Funding

NCMRR-DC Core Molecular & Functional Outcome Measures in Rehabilitation MedicineR24HD050846 · NICHD · CHILDREN'S RESEARCH INSTITUTE · PI KNOBLACH, SUSAN M · 2005 to 2014
$8.6M
Molecular Pathphysiology of FSHD muscular dystrophy via genome-wide approachesR01AR052027 · NIAMS · CHILDREN'S RESEARCH INSTITUTE · PI CHEN, YI-WEN · 2007 to 2011
$2.2M
Molecular Signatures of Muscle RehabilitationR01HD048051 · NICHD · UNIVERSITY OF FLORIDA · PI VANDENBORNE, KRISTA H · 2004 to 2009
$1.7M
NIAMS NIH HHS 1R01AR052027NIAMS NIH HHS R01 AR052027NICHD NIH HHS 1R24HD050846NICHD NIH HHS R01 HD048051NICHD NIH HHS R01HD048051NICHD NIH HHS R24 HD050846
6 · The paper itself

Abstract

The genetic and molecular events associated with changes in muscle mass and function after SCI and after the implementation of candidate therapeutic approaches are still not completely known. The overall objective of this study was to identify key molecular pathways activated with muscle remodeling after SCI and locomotor training. We implemented treadmill training in a well-characterized rat model of moderate SCI and performed genome wide expression profiling on soleus muscles at multiple time points: 3, 8, and 14 days after SCI. We found that the activity of the protein ubiquitination and mitochondrial function related pathways was altered with SCI and corrected with treadmill training. The BMP pathway was differentially activated with early treadmill training as shown by Ingenuity Pathway Analysis. The expression of several muscle mass regulators was modulated by treadmill training, including Fst, Jun, Bmpr2, Actr2b, and Smad3. In addition, key players in fatty acids metabolism (Lpl and Fabp3) responded to both SCI induced inactivity and reloading with training. The decrease in Smad3 and Fst early after the initiation of treadmill training was confirmed by RT-PCR. Our data suggest that TGFβ/Smad3 signaling may be mainly involved in the decrease in muscle mass observed with SCI, while the BMP pathway was activated with treadmill training.

Indexed as

Exercise TherapyAnimalsBone Morphogenetic ProteinsGene Expression ProfilingMotor ActivityMuscle DevelopmentMuscle, SkeletalRatsSpinal Cord InjuriesUbiquitinationBone Morphogenetic Proteins

Identifiers

PMID26380273
PMCPMC4561307
OpenAlexW1659002779

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.