Evidence map›Paper›PMID 26379770›Full record

ArticleBiotechnology for biofuels2015

Physiological roles of pyruvate ferredoxin oxidoreductase and pyruvate formate-lyase in Thermoanaerobacterium saccharolyticum JW/SL-YS485.

Jilai Zhou, Daniel G Olson, Anthony A Lanahan, Liang Tian, Sean Jean-Loup Murphy, Jonathan Lo, Lee R Lynd

Abstract read
In one paragraph

Article in Biotechnology for biofuels, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

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  4. Genetic investigation of hydrogenases inApplied and environmental microbiology · 2025
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  6. The potential of native and engineered Clostridia for biomass biorefining.Frontiers in bioengineering and biotechnology · 2024
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  9. Review
  10. Article
  11. Characterization ofBiology · 2022
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  12. Functional Analysis of HApplied and environmental microbiology · 2022
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  13. Article
  14. Article
  15. Article
  16. Conversion of phosphoenolpyruvate to pyruvate inMetabolic engineering communications · 2020
    Article
  17. mSystems · 2020
    Article
  18. EngineeredBiotechnology for biofuels · 2019
    Article
  19. Metabolic engineering ofBiotechnology for biofuels · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jilai ZhouThayer School of Engineering, Hanover, NH 03755 USA ; BioEnergy Science Center, Oak Ridge, TN 37830 USA.
Daniel G OlsonThayer School of Engineering, Hanover, NH 03755 USA ; BioEnergy Science Center, Oak Ridge, TN 37830 USA.
Anthony A LanahanThayer School of Engineering, Hanover, NH 03755 USA ; BioEnergy Science Center, Oak Ridge, TN 37830 USA.
Liang TianThayer School of Engineering, Hanover, NH 03755 USA ; BioEnergy Science Center, Oak Ridge, TN 37830 USA.
Sean Jean-Loup MurphyThayer School of Engineering, Hanover, NH 03755 USA ; BioEnergy Science Center, Oak Ridge, TN 37830 USA.
Jonathan LoDepartment of Biological Sciences at Dartmouth College, Hanover, NH 03755 USA ; BioEnergy Science Center, Oak Ridge, TN 37830 USA.
Lee R LyndThayer School of Engineering, Hanover, NH 03755 USA ; Department of Biological Sciences at Dartmouth College, Hanover, NH 03755 USA ; BioEnergy Science Center, Oak Ridge, TN 37830 USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThermoanaerobacter saccharolyticum is a thermophilic microorganism that has been engineered to produce ethanol at high titer (30-70 g/L) and greater than 90 % theoretical yield. However, few genes involved in pyruvate to ethanol production pathway have been unambiguously identified. In T. saccharolyticum, the products of six putative pfor gene clusters and one pfl gene may be responsible for the conversion of pyruvate to acetyl-CoA. To gain insights into the physiological roles of PFOR and PFL, we studied the effect of deletions of several genes thought to encode these activities.

resultsIt was found that pyruvate ferredoxin oxidoreductase enzyme (PFOR) is encoded by the pforA gene and plays a key role in pyruvate dissimilation. We further demonstrated that pyruvate formate-lyase activity (PFL) is encoded by the pfl gene. Although the pfl gene is normally expressed at low levels, it is crucial for biosynthesis in T. saccharolyticum. In pforA deletion strains, pfl expression increased and was able to partially compensate for the loss of PFOR activity. Deletion of both pforA and pfl resulted in a strain that required acetate and formate for growth and produced lactate as the primary fermentation product, achieving 88 % theoretical lactate yield.

conclusionPFOR encoded by Tsac_0046 and PFL encoded by Tsac_0628 are only two routes for converting pyruvate to acetyl-CoA in T. saccharolyticum. The physiological role of PFOR is pyruvate dissimilation, whereas that of PFL is supplying C1 units for biosynthesis.

Indexed as

C1 metabolismPyruvate ferredoxin oxidoreductasePyruvate formate-lyasePyruvate metabolismThermoanaerobacter saccharolyticum

Identifiers

PMID26379770
PMCPMC4570089

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.