Evidence map›Paper›PMID 26378234›Full record

ArticleThe Journal of biological chemistry2015

Aberrant Retinoblastoma (RB)-E2F Transcriptional Regulation Defines Molecular Phenotypes of Osteosarcoma.

Milcah C Scott, Aaron L Sarver, Hirotaka Tomiyasu, Ingrid Cornax, Jamie Van Etten, Jyotika Varshney, M Gerard O'Sullivan, Subbaya Subramanian, Jaime F Modiano

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 4 countries.

Milcah C ScottAnimal Cancer Care and Research Program; Departments of Veterinary Clinical Sciences; Masonic Cancer Center.
Aaron L SarverAnimal Cancer Care and Research Program; Departments of Veterinary Clinical Sciences.
Hirotaka TomiyasuAnimal Cancer Care and Research Program; Departments of Veterinary Clinical Sciences; Masonic Cancer Center.
Ingrid CornaxAnimal Cancer Care and Research Program; Masonic Cancer Center; Veterinary Population Medicine.
Jamie Van EttenMasonic Cancer Center; Department of Surgery, School of Medicine.
Jyotika VarshneyAnimal Cancer Care and Research Program; Department of Surgery, School of Medicine; Veterinary Medicine Graduate Program, College of Veterinary Medicine.
M Gerard O'SullivanAnimal Cancer Care and Research Program; Masonic Cancer Center; Veterinary Population Medicine.
Subbaya SubramanianAnimal Cancer Care and Research Program; Masonic Cancer Center; Department of Surgery, School of Medicine.
Jaime F ModianoAnimal Cancer Care and Research Program; Departments of Veterinary Clinical Sciences; Masonic Cancer Center; Stem Cell Institute; Center for Immunology, University of Minnesota, Minneapolis, Minnesota 55455. Electronic address: stolson@uic.edu.
Breast Cancer Care · GBMasonic Cancer CenterUniversity of Minnesota · US

Funding

Women's CancerP30CA077598 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Douglas Yee · 1998 to 2026
$100.4M
TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
NCI NIH HHS P30 CA077598NCI NIH HHS T32 CA009138NCI NIH HHS T32 CA09138
6 · The paper itself

Abstract

We previously identified two distinct molecular subtypes of osteosarcoma through gene expression profiling. These subtypes are associated with distinct tumor behavior and clinical outcomes. Here, we describe mechanisms that give rise to these molecular subtypes. Using bioinformatic analyses, we identified a significant association between deregulation of the retinoblastoma (RB)-E2F pathway and the molecular subtype with worse clinical outcomes. Xenotransplantation models recapitulated the corresponding behavior for each osteosarcoma subtype; thus, we used cell lines to validate the role of the RB-E2F pathway in regulating the prognostic gene signature. Ectopic RB resets the patterns of E2F regulated gene expression in cells derived from tumors with worse clinical outcomes (molecular phenotype 2) to those comparable with those observed in cells derived from tumors with less aggressive outcomes (molecular phenotype 1), providing a functional association between RB-E2F dysfunction and altered gene expression in osteosarcoma. DNA methyltransferase and histone deacetylase inhibitors similarly reset the transcriptional state of the molecular phenotype 2 cells from a state associated with RB deficiency to one seen with RB sufficiency. Our data indicate that deregulation of RB-E2F pathway alters the epigenetic landscape and biological behavior of osteosarcoma.

Indexed as

AnimalsCell Line, TumorDogsE2F Transcription FactorsGene Expression RegulationHumansJurkat CellsOsteosarcomaPrognosisRetinoblastoma ProteinTranscription, GeneticE2F Transcription FactorsRetinoblastoma Proteinchromatin remodelingE2F transcription factorgene expressionosteosarcomaretinoblastoma protein (pRb, RB)

Identifiers

PMID26378234
PMCPMC4653667
OpenAlexW2239488731

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.