Evidence map›Paper›PMID 26378178›Full record

ArticleJournal of virology2015

Resolving the Origin of Rabbit Hemorrhagic Disease Virus: Insights from an Investigation of the Viral Stocks Released in Australia.

John-Sebastian Eden, Andrew J Read, Janine A Duckworth, Tanja Strive, Edward C Holmes

Abstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Benign Rabbit Calicivirus in New Zealand.Applied and environmental microbiology · 2017
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John-Sebastian EdenMarie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Biological Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW, Australia Centre for Virus Research, Westmead Millennium Institute, Westmead, NSW, Australia.
Andrew J ReadInvasive Animals Cooperative Research Centre, University of Canberra, Bruce, ACT, Australia Elizabeth Macarthur Agricultural Institute, Menangle, NSW, Australia.
Janine A DuckworthInvasive Animals Cooperative Research Centre, University of Canberra, Bruce, ACT, Australia Landcare Research, Wildlife Ecology & Management, Lincoln, New Zealand.
Tanja StriveInvasive Animals Cooperative Research Centre, University of Canberra, Bruce, ACT, Australia Commonwealth Scientific and Industrial Research Organisation-Health & Biosecurity, Black Mountain, ACT, Australia.
Edward C HolmesMarie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Biological Sciences and Sydney Medical School, The University of Sydney, Sydney, NSW, Australia edward.holmes@sydney.edu.au.

Funding

Genomic analysis of the canonical case of virulence evolution: Myxomatosis in AuR01AI093804 · NIAID · PENNSYLVANIA STATE UNIVERSITY, THE · PI READ, ANDREW F. · 2012 to 2016
$2.7M
NIAID NIH HHS R01 AI093804NIAID NIH HHS R01 AI093804-01A1
6 · The paper itself

Abstract

To resolve the evolutionary history of rabbit hemorrhagic disease virus (RHDV), we performed a genomic analysis of the viral stocks imported and released as a biocontrol measure in Australia, as well as a global phylogenetic analysis. Importantly, conflicts were identified between the sequences determined here and those previously published that may have affected evolutionary rate estimates. By removing likely erroneous sequences, we show that RHDV emerged only shortly before its initial description in China.

Indexed as

Evolution, MolecularModels, MolecularPhylogenyAustraliaBase SequenceComputational BiologyHemorrhagic Disease Virus, RabbitMolecular Sequence DataPolymorphism, Single NucleotideSequence Analysis, DNA

Identifiers

PMID26378178
PMCPMC4645337

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.