Evidence map›Paper›PMID 26377942›Full record

ArticleMolecular genetics and genomics : MGG2016

Comparative transcriptome analyses of deltamethrin-susceptible and -resistant Culex pipiens pallens by RNA-seq.

Yuan Lv, Weijie Wang, Shanchao Hong, Zhentao Lei, Fujin Fang, Qin Guo, Shengli Hu, Mengmeng Tian, Bingqian Liu, Donghui Zhang and 5 more

Abstract read
In one paragraph

Article in Molecular genetics and genomics : MGG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 61 citations in OpenAlex.

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  13. Insecticidal Activity ofFrontiers in genetics · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Yuan LvDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Weijie WangDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Shanchao HongDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Zhentao LeiDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Fujin FangDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Qin GuoDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Shengli HuDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Mengmeng TianDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Bingqian LiuDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Donghui ZhangDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Yan SunDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Lei MaDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Bo ShenDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China.
Dan ZhouDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China. zdd1209love@163.com.
Changliang ZhuDepartment of Pathogen Biology, Nanjing Medical University, 210029, Nanjing, Jiangsu, China. clzhu@njmu.edu.cn.
Nanjing Medical University · CN

Funding

Insecticide Resistance in Culex pipiens pallens MosquitoesR01AI075746 · NIAID · NANJING MEDICAL UNIVERSITY · PI ZHU, CHANGLIANG · 2008 to 2016
$795k
NIAID NIH HHS 2R01AI075746NIAID NIH HHS R01 AI075746
6 · The paper itself

Abstract

The widespread and improper use of pyrethroid insecticides, such as deltamethrin, has resulted in the evolution of resistance in many mosquito species, including Culex pipiens pallens. With the development of high-throughput sequencing, it is possible to massively screen pyrethroid resistance-associated gene. In this study, we used Illumina-Solexa transcriptome sequencing to identify genes that are expressed differently in deltamethrin-susceptible and -resistant strains of Culex pipiens pallens as a critical knowledge base for further studies. A total of 4,961,197,620 base pairs and 55,124,418 reads were sequenced, mapped to the Culex quinquefasciatus genome and assembled into 17,679 known genes. We recorded 1826 significantly differentially expressed genes (DEGs). Among them, 1078 genes were up-regulated and 748 genes were down-regulated in the deltamethrin-resistant strain compared to -susceptible strain. These DEGs contained cytochrome P450 s, cuticle proteins, UDP-glucuronosyltransferases, lipases, serine proteases, heat shock proteins, esterases and others. Among the 1826 DEGs, we found that the transcriptional levels of CYP6AA9 in the laboratory populations was elevated as the levels of deltamethrin resistance increased. Moreover, the expression levels of the CYP6AA9 were significantly higher in the resistant strains than the susceptible strains in three different field populations. We further confirmed the association between the CYP6AA9 gene and deltamethrin resistance in mosquitoes by RNA interfering (RNAi). Altogether, we explored massive potential pyrethroid resistance-associated genes and demonstrated that CYP6AA9 participated in the pyrethroid resistance in mosquitoes.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCloning, MolecularCulexCytochrome P-450 Enzyme SystemGene Expression ProfilingInsecticide ResistanceInsect ProteinsMolecular Sequence DataNitrilesPyrethrinsRNASequence AlignmentTranscriptomeCytochrome P-450 Enzyme SystemdecamethrinInsect ProteinsNitrilesPyrethrinsRNACYP6AA9MosquitoesPyrethroidsRNAiRNA-seq

Identifiers

PMID26377942
PMCPMC4732919
OpenAlexW1907865764

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.