Evidence map›Paper›PMID 26377631›Full record

ArticleDNA repair2015

Distinct functional consequences of MUTYH variants associated with colorectal cancer: Damaged DNA affinity, glycosylase activity and interaction with PCNA and Hus1.

Megan K Brinkmeyer, Sheila S David

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Noncatalytic Domains in DNA Glycosylases.International journal of molecular sciences · 2022
    Review
  7. MUTYH: Not just polyposis.World journal of clinical oncology · 2020
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Correlations of PCNA expression with thyroid cancer ultrasound and histopathologic features.International journal of clinical and experimental pathology · 2019
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Megan K BrinkmeyerDepartment of Chemistry, University of California Davis, Davis, CA 95616, United States.
Sheila S DavidDepartment of Chemistry, University of California Davis, Davis, CA 95616, United States. Electronic address: ssdavid@ucdavis.edu.
University of California, Davis · US

Funding

RECOGNITION AND REPAIR OF MISMATCHED DNA BY MUTYR01CA067985 · NCI · UNIVERSITY OF UTAH · PI DAVID, SHEILA SUE · 2000 to 2025
$5.6M
G/A MISMATCH RECOGNITION AND REPAIR BY E COLI MUTYR29CA067985 · NCI · UNIVERSITY OF UTAH · PI DAVID, SHEILA SUE · 1995 to 1999
–
NCI NIH HHS CA067985NCI NIH HHS R01 CA067985NCI NIH HHS R29 CA067985
6 · The paper itself

Abstract

MUTYH is a base excision repair (BER) enzyme that prevents mutations in DNA associated with 8-oxoguanine (OG) by catalyzing the removal of adenine from inappropriately formed OG:A base-pairs. Germline mutations in the MUTYH gene are linked to colorectal polyposis and a high risk of colorectal cancer, a syndrome referred to as MUTYH-associated polyposis (MAP). There are over 300 different MUTYH mutations associated with MAP and a large fraction of these gene changes code for missense MUTYH variants. Herein, the adenine glycosylase activity, mismatch recognition properties, and interaction with relevant protein partners of human MUTYH and five MAP variants (R295C, P281L, Q324H, P502L, and R520Q) were examined. P281L MUTYH was found to be severely compromised both in DNA binding and base excision activity, consistent with the location of this variation in the iron-sulfur cluster (FCL) DNA binding motif of MUTYH. Both R295C and R520Q MUTYH were found to have low fractions of active enzyme, compromised affinity for damaged DNA, and reduced rates for adenine excision. In contrast, both Q324H and P502L MUTYH function relatively similarly to WT MUTYH in both binding and glycosylase assays. However, P502L and R520Q exhibited reduced affinity for PCNA (proliferation cell nuclear antigen), consistent with their location in the PCNA-binding motif of MUTYH. Whereas, only Q324H, and not R295C, was found to have reduced affinity for Hus1 of the Rad9-Hus1-Rad1 complex, despite both being localized to the same region implicated for interaction with Hus1. These results underscore the diversity of functional consequences due to MUTYH variants that may impact the progression of MAP.

Indexed as

DNA RepairAdenomatous Polyposis ColiCell Cycle ProteinsColorectal NeoplasmsDNADNA DamageDNA GlycosylasesGerm-Line MutationHumansMutation, MissenseProliferating Cell Nuclear AntigenProtein BindingCell Cycle ProteinsDNADNA GlycosylasesHUS1 protein, humanmutY adenine glycosylaseProliferating Cell Nuclear Antigen8-OxoguanineBase excision repair (BER)Cancer variantsDNA glycosylaseEnzyme kineticsHus1MUTYH-associated polyposis (MAP)PCNASingle nucleotide polymorphisms

Identifiers

PMID26377631
PMCPMC5098423
OpenAlexW1195067316

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.