Evidence map›Paper›PMID 26377625›Full record

ArticleWorld journal of microbiology & biotechnology2015

Endophytic bacterial communities associated with two explant sources of Eucalyptus benthamii Maiden & Cambage.

Natalia Pimentel Esposito-Polesi, Pedro Avelino Maia de Andrade, Cristina Vieira de Almeida, Fernando Dini Andreote, Marcílio de Almeida

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Article in World journal of microbiology & biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Frontiers in plant science · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Natalia Pimentel Esposito-PolesiBiological Science Department, "Luiz de Queiroz" Superior College of Agriculture, University of São Paulo (ESALQ/USP), Pádua Dias Avenue, 11, P.O. Box 9, Piracicaba, SP, 13418-900, Brazil. esposito.polesi@gmail.com.
Pedro Avelino Maia de AndradeSoil Science Department, ''Luiz de Queiroz'' Superior College of Agriculture, University de São Paulo (ESALQ/USP), Pádua Dias Avenue, 11, P.O. Box 9, Piracicaba, SP, 13418-900, Brazil.
Cristina Vieira de AlmeidaIn Vitro Palm Consultoria, Estudo e Desenvolvimento Biológico Ltda, Rua Itajobi, 421, Piracicaba, SP, 13432-000, Brazil.
Fernando Dini AndreoteSoil Science Department, ''Luiz de Queiroz'' Superior College of Agriculture, University de São Paulo (ESALQ/USP), Pádua Dias Avenue, 11, P.O. Box 9, Piracicaba, SP, 13418-900, Brazil.
Marcílio de AlmeidaBiological Science Department, "Luiz de Queiroz" Superior College of Agriculture, University of São Paulo (ESALQ/USP), Pádua Dias Avenue, 11, P.O. Box 9, Piracicaba, SP, 13418-900, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Micropropagation has been applied in the recovery and rejuvenation of adult trees, which is achieved by various subcultures in the multiplication phase. This strategy has brought questions about the endophytic microbiota associated with these plants along its manipulation. Therefore, the aim of this study was to evaluate the composition of the endophytic bacterial communities associated with two explants sources [the canopy branches (CB) and the trunk base of the tree (TB)] under prolonged in vitro cultivation. In addition we analyzed the bacterial community dynamic along the subcultures in different micropropagation phases. Bacterial DNA was extracted from samples of mini-stumps (in vivo) from CB and TB and in micro-stumps produced by in vitro cultivations of these explants sources--both originated from one single matrix plant of Eucalyptus benthamii. In vitro establishment occurred in two dates and the evaluation of endophytic bacterial communities was made in vivo and in vitro samples (on 10th, 13th and 16th subcultures), when elongated shoots and roots were analyzed. Analysis was performed by PCR-DGGE based on the V6 region of ribosomal gene 16S rDNA. Bands profiles showed differences in communities between in vivo and in vitro samples, and also distinctions of communities assessed in the subcultures, elongated and rooted samples. Distinctions in the composition of endophytic bacterial communities were greater in CB micro-stumps. These results indicate a differential colonization of explants by endophytic bacteria, with predominance of common (ever-present) endophytes in TB samples and casual, here named opportunistic, in CB samples.

Indexed as

BacteriaDNA, BacterialDNA, RibosomalEndophytesEucalyptusIn Vitro TechniquesPhylogenyPlant RootsPlant ShootsRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialDNA, RibosomalRNA, Ribosomal, 16SEucalyptusExplantsMicropropagationSuccessive subcultures

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.