Evidence map›Paper›PMID 26376815›Full record

ArticleBMC evolutionary biology2015

Genetic and morphological evidence for introgression between three species of willows.

Johan Fogelqvist, Alla V Verkhozina, Alexander I Katyshev, Pascal Pucholt, Christina Dixelius, Ann Christin Rönnberg-Wästljung, Martin Lascoux, Sofia Berlin

Abstract read
In one paragraph

Article in BMC evolutionary biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Detection of Hybrids in Willows (Plants (Basel, Switzerland) · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. The global epidemiology of emergingStudies in mycology · 2020
    Article
  10. Triad hybridization via a conduit species.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. TallPeerJ · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Johan FogelqvistSwedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-75007, Uppsala, Sweden. johan.fogelqvist@slu.se.
Alla V VerkhozinaSiberian Institute of Plant Physiology & Biochemistry, Irkutsk-33, P.O. Box 317, 664033, Irkutsk, Russia. allaverh@list.ru.
Alexander I KatyshevSiberian Institute of Plant Physiology & Biochemistry, Irkutsk-33, P.O. Box 317, 664033, Irkutsk, Russia. alex@sifibr.irk.ru.
Pascal PucholtSwedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-75007, Uppsala, Sweden. pascal.pucholt@slu.se.
Christina DixeliusSwedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-75007, Uppsala, Sweden. christina.dixelius@slu.se.
Ann Christin Rönnberg-WästljungSwedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-75007, Uppsala, Sweden. anki.wastljung@slu.se.
Martin LascouxUppsala University, Department of Ecology and Genetics, Evolutionary Biology Centre, Science for Life Laboratory, Norbyvägen 18D, 752 36, Uppsala, Sweden. martin.lascoux@ebc.uu.se.
Sofia BerlinSwedish University of Agricultural Sciences, Department of Plant Biology, Uppsala BioCenter, Linnean Centre for Plant Biology, P.O. Box 7080, SE-75007, Uppsala, Sweden. sofia.berlin@slu.se.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHybridization and introgression are said to occur relatively frequently in plants, and in particular among different species of willows. However, data on the actual frequency of natural hybridization and introgression is rare. Here, we report the first fine-scale genetic analysis of a contact zone shared between the three basket willow species, Salix dasyclados, S. schwerinii and S. viminalis in the vicinity of the Lake Baikal in Southern Siberia. Individuals were sampled in fourteen populations and classified as pure species or hybrids based on a set of morphological characters. They were then genotyped at 384 nuclear SNP and four chloroplast SSR loci. The STRUCTURE and NewHybrids softwares were used to estimate the frequency and direction of hybridization using genotypic data at the nuclear SNP loci.

resultsAs many as 19 % of the genotyped individuals were classified as introgressed individuals and these were mainly encountered in the centre of the contact zone. All introgressed individuals were backcrosses to S. viminalis or S. schwerinii and no F1 or F2 hybrids were found. The rest of the genotyped individuals were classified as pure species and formed two clusters, one with S. schwerinii individuals and the other with S. viminalis and S. dasyclados individuals. The two clusters were significantly genetically differentiated, with F ST = 0.333 (0.282-0.382, p < 0.001). In contrast, for the chloroplast haplotypes, no genetic differentiation was observed as they were completely shared between the species. Based on morphological classification only 5 % of the individuals were classified as introgressed individuals, which was much less than what was detected using genotypic data.

conclusionsWe have discovered a new willow hybrid zone with relatively high frequency of introgressed individuals. The low frequency of F1 hybrids indicates that ongoing hybridization is limited, which could be because of the presence of reproductive barriers or simply because the conditions are not favorable for hybridization. We further conclude that in order to get a complete picture of the species composition of a hybrid zone it is necessary to use a combination of morphological characters and genetic data from both nuclear and chloroplast markers.

Indexed as

DNA, PlantGenotypeHybridization, GeneticMicrosatellite RepeatsPolymorphism, Single NucleotideSalixSiberiaDNA, Plant

Identifiers

PMID26376815
PMCPMC4574262

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.