Evidence map›Paper›PMID 26375680›Full record

ArticlePloS one2015

Complex Population Structure and Virulence Differences among Serotype 2 Streptococcus suis Strains Belonging to Sequence Type 28.

Taryn B T Athey, Jean-Philippe Auger, Sarah Teatero, Audrey Dumesnil, Daisuke Takamatsu, Jessica Wasserscheid, Ken Dewar, Marcelo Gottschalk, Nahuel Fittipaldi

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Review
  2. IDCases · 2026
    Article
  3. One health (Amsterdam, Netherlands) · 2025
    Review
  4. Article
  5. Rapid and specific detection ofFrontiers in veterinary science · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Population structure and genetic diversity ofFrontiers in microbiology · 2023
    Article
  12. Characterisation ofPathogens (Basel, Switzerland) · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Microorganisms · 2020
    Article
  17. Article
  18. Article
  19. Tools for Molecular Epidemiology ofPathogens (Basel, Switzerland) · 2020
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Taryn B T AtheyPublic Health Ontario, Toronto, Ontario, Canada.
Jean-Philippe AugerGroupe de Recherche sur les Maladies Infectieuses du Porc, Faculté de Médecine Vétérinaire, Université de Montréal, St-Hyacinthe, Quebec, Canada.
Sarah TeateroPublic Health Ontario, Toronto, Ontario, Canada.
Audrey DumesnilGroupe de Recherche sur les Maladies Infectieuses du Porc, Faculté de Médecine Vétérinaire, Université de Montréal, St-Hyacinthe, Quebec, Canada.
Daisuke TakamatsuBacterial and Parasitic Diseases Research Division, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Japan; The United Graduate School of Veterinary Sciences, Gifu University, Gifu, Japan.
Jessica WasserscheidDepartment of Human Genetics, McGill University and Génome Québec Innovation Centre, Montreal, Quebec, Canada.
Ken DewarDepartment of Human Genetics, McGill University and Génome Québec Innovation Centre, Montreal, Quebec, Canada.
Marcelo GottschalkGroupe de Recherche sur les Maladies Infectieuses du Porc, Faculté de Médecine Vétérinaire, Université de Montréal, St-Hyacinthe, Quebec, Canada.
Nahuel FittipaldiPublic Health Ontario, Toronto, Ontario, Canada; Department of Laboratory Medicine and Pathobiology, Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptococcus suis is a major swine pathogen and a zoonotic agent. Serotype 2 strains are the most frequently associated with disease. However, not all serotype 2 lineages are considered virulent. Indeed, sequence type (ST) 28 serotype 2 S. suis strains have been described as a homogeneous group of low virulence. However, ST28 strains are often isolated from diseased swine in some countries, and at least four human ST28 cases have been reported. Here, we used whole-genome sequencing and animal infection models to test the hypothesis that the ST28 lineage comprises strains of different genetic backgrounds and different virulence. We used 50 S. suis ST28 strains isolated in Canada, the United States and Japan from diseased pigs, and one ST28 strain from a human case isolated in Thailand. We report a complex population structure among the 51 ST28 strains. Diversity resulted from variable gene content, recombination events and numerous genome-wide polymorphisms not attributable to recombination. Phylogenetic analysis using core genome single-nucleotide polymorphisms revealed four discrete clades with strong geographic structure, and a fifth clade formed by US, Thai and Japanese strains. When tested in experimental animal models, strains from this latter clade were significantly more virulent than a Canadian ST28 reference strain, and a closely related Canadian strain. Our results highlight the limitations of MLST for both phylogenetic analysis and virulence prediction and raise concerns about the possible emergence of ST28 strains in human clinical cases.

Indexed as

VirulenceAnimalsCanadaDNA, BacterialHumansJapanMiceMice, Inbred C57BLMolecular Sequence DataMultilocus Sequence TypingPhylogenyPopulation DynamicsSpecies SpecificityStreptococcal InfectionsStreptococcus suisSwineDNA, Bacterial

Identifiers

PMID26375680
PMCPMC4574206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.