Evidence map›Paper›PMID 26375518›Full record

ArticleNanotoxicology2016

Alterations in DNA methylation corresponding with lung inflammation and as a biomarker for disease development after MWCNT exposure.

Traci A Brown, Joong Won Lee, Andrij Holian, Virginia Porter, Harley Fredriksen, Minju Kim, Yoon Hee Cho

Open access · greenAbstract read
In one paragraph

Article in Nanotoxicology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Epigenetic regulation of pulmonary inflammation.Seminars in cell & developmental biology · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. G9a promotes inflammation inAnnals of translational medicine · 2022
    Article
  9. Article
  10. New "Omics" Approaches as Tools to Explore Mechanistic Nanotoxicology.Advances in experimental medicine and biology · 2022
    Article
  11. Current views in chronic obstructive pulmonary disease pathogenesis and management.Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society · 2021
    Review
  12. Article
  13. Epigenetic Effects of Nanomaterials and Nanoparticles.Journal of nanobiotechnology · 2021
    Review
  14. Review
  15. Review
  16. Role of AJournal of nanobiotechnology · 2019
    Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Traci A Browna Department of Biomedical and Pharmaceutical Sciences , Center for Environmental Health Sciences, University of Montana , Missoula , MT , USA and.
Joong Won Leea Department of Biomedical and Pharmaceutical Sciences , Center for Environmental Health Sciences, University of Montana , Missoula , MT , USA and.
Andrij Holiana Department of Biomedical and Pharmaceutical Sciences , Center for Environmental Health Sciences, University of Montana , Missoula , MT , USA and.
Virginia Portera Department of Biomedical and Pharmaceutical Sciences , Center for Environmental Health Sciences, University of Montana , Missoula , MT , USA and.
Harley Fredriksenb College of Letters and Science, University of Wisconsin-Stevens Point , Stevens Point , WI , USA.
Minju Kima Department of Biomedical and Pharmaceutical Sciences , Center for Environmental Health Sciences, University of Montana , Missoula , MT , USA and.
Yoon Hee Choa Department of Biomedical and Pharmaceutical Sciences , Center for Environmental Health Sciences, University of Montana , Missoula , MT , USA and.
University of Montana · USCenter for Environmental Health · USUniversity of Wisconsin–Stevens Point · US

Funding

Molecular Histology and Fluorescent ImagingP30GM103338 · NIGMS · UNIVERSITY OF MONTANA · PI ROBERTS, KEVAN · 2013 to 2017
$5.6M
Dietary DHA attenuation of nanoparticle inflammationR01ES023209 · NIEHS · UNIVERSITY OF MONTANA · PI HOLIAN, ANDRIJ · 2014 to 2018
$2.8M
MOLECULAR GENETICS OF THE BACTERIO-OPSIN GENEF32GM010333 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI LEONG, DIANE U · 1986 to 1987
–
NIEHS NIH HHS ES023209NIEHS NIH HHS R01 ES023209NIGMS NIH HHS P30GM10333NIGMS NIH HHS P30 GM103338
6 · The paper itself

Abstract

Use of multi-walled carbon nanotubes (MWCNT) is growing which increases occupational exposures to these materials. Their toxic potential makes it important to have an in-depth understanding of the inflammation and disease that develops due to exposure. Epigenetics is one area of interest that has been quickly developing to assess disease processes due to its ability to change gene expression and thus the lung environment after exposure. In this study, promoter methylation of inflammatory genes (IFN-γ and TNF-α) was measured after MWCNT exposure using the pyrosequencing assay and found to correlate with initial cytokine production. In addition, methylation of a gene involved in tissue fibrosis (Thy-1) was also altered in a way that matched collagen deposition. In addition to using epigenetics to better understand disease processes, it has also been used as a biomarker of exposure and disease. In this study, global methylation was determined in the lung to ascertain whether MWCNT alter global methylation at the site of exposure and if those alterations coincide with disease development. Then, global methylation levels were determined in the blood to ascertain whether global methylation could be used as a biomarker of exposure in a more easily accessible tissue. Using the LuUminometric Methylation Assay (LUMA) and 5-Methylcytosine (5-mC) Quantification assay, we found that MWCNT lead to DNA hypomethylation in the lung and blood, which coincided with disease development. This study provides initial data showing that alterations in gene-specific methylation correspond with an inflammatory response to MWCNT exposure. In addition, global DNA methylation in the lung and blood coincides with MWCNT-induced disease development, suggesting its potential as a biomarker of both exposure and disease development.

Indexed as

AnimalsBiomarkersDNA MethylationInhalation ExposureInterferon-gammaMiceNanotubes, CarbonOccupational ExposurePneumoniaPromoter Regions, GeneticPulmonary FibrosisThy-1 AntigensTumor Necrosis Factor-alphaBiomarkersInterferon-gammaNanotubes, CarbonThy-1 AntigensTumor Necrosis Factor-alpha5-mCIFN-γinflammationLUMAmethylationMWCNTThy-1TNF-α

Identifiers

PMID26375518
PMCPMC4779417
OpenAlexW1698395555

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.