Evidence map›Paper›PMID 26375492›Full record

ArticleJournal of biomedical informatics2015

A hybrid model for automatic identification of risk factors for heart disease.

Hui Yang, Jonathan M Garibaldi

Abstract read
In one paragraph

Article in Journal of biomedical informatics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Clinical concept extraction: A methodology review.Journal of biomedical informatics · 2020
    Review
  10. Review
  11. Article
  12. Review
  13. Robust clinical marker identification for diabetic kidney disease with ensemble feature selection.Journal of the American Medical Informatics Association : JAMIA · 2019
    Article
  14. Article
  15. Article
  16. Utilizing Chinese Admission Records for MACE Prediction of Acute Coronary Syndrome.International journal of environmental research and public health · 2016
    Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Hui YangSchool of Computer Science, University of Nottingham, Nottingham, UK; Advanced Data Analysis Centre, University of Nottingham, Nottingham, UK. Electronic address: Hui.Yang@nottingham.ac.uk.
Jonathan M GaribaldiSchool of Computer Science, University of Nottingham, Nottingham, UK; Advanced Data Analysis Centre, University of Nottingham, Nottingham, UK.

Funding

Challenges in Natural Language Processing in Clinical TextR13LM011411 · NLM · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI UZUNER, OZLEM · 2012 to 2016
$98k
Medical Research Council MR/N005953/1NLM NIH HHS R13 LM011411
6 · The paper itself

Abstract

Coronary artery disease (CAD) is the leading cause of death in both the UK and worldwide. The detection of related risk factors and tracking their progress over time is of great importance for early prevention and treatment of CAD. This paper describes an information extraction system that was developed to automatically identify risk factors for heart disease in medical records while the authors participated in the 2014 i2b2/UTHealth NLP Challenge. Our approaches rely on several nature language processing (NLP) techniques such as machine learning, rule-based methods, and dictionary-based keyword spotting to cope with complicated clinical contexts inherent in a wide variety of risk factors. Our system achieved encouraging performance on the challenge test data with an overall micro-averaged F-measure of 0.915, which was competitive to the best system (F-measure of 0.927) of this challenge task.

Indexed as

NarrationNatural Language ProcessingAgedCohort StudiesComorbidityComputer SecurityConfidentialityCoronary Artery DiseaseData MiningElectronic Health RecordsFemaleHumansIncidenceLongitudinal StudiesMaleMiddle AgedClinical text miningHeart diseaseHybrid modelMachine learningNatural language processingRisk factorsRule-based approach

Identifiers

PMID26375492
PMCPMC4989091

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.