Evidence map›Paper›PMID 26375424›Full record

ArticleMolecular and cellular endocrinology2015

Novel application of luciferase assay for the in vitro functional assessment of KAL1 variants in three females with septo-optic dysplasia (SOD).

Mark J McCabe, Youli Hu, Louise C Gregory, Carles Gaston-Massuet, Kyriaki S Alatzoglou, José W Saldanha, Angelica Gualtieri, Ajay Thankamony, Ieuan Hughes, Sharron Townshend and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular and cellular endocrinology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Brain Lesions in Children with Unilateral Spastic Cerebral Palsy.Medical archives (Sarajevo, Bosnia and Herzegovina) · 2017
    Article
  12. Clinical characteristics of septo-optic dysplasia accompanied by congenital central hypothyroidism in Japan.Clinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 4 countries.

Mark J McCabeSection of Genetics and Epigenetics in Health and Disease, Genetics and Genomic Medicine Programme, UCL Institute of Child Health, London, UK; Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia; St Vincent's Clinical School, UNSW Australia, Sydney, NSW, Australia.
Youli HuCentre for Neuroendocrinology, Royal Free Hospital and University College Medical School, University College London, London, UK; Department of Anaesthesiology, Nanjing Medical University First Affiliated Hospital, Jiangsu Province Hospital, Nanjing 210029, China.
Louise C GregorySection of Genetics and Epigenetics in Health and Disease, Genetics and Genomic Medicine Programme, UCL Institute of Child Health, London, UK.
Carles Gaston-MassuetNeural Development Unit, UCL Institute of Child Health, London, UK; Centre for Endocrinology, William Harvey Research Institute, Barts and the London School of Medicine and Dentistry, Queen Mary University of London, John Vane Science Centre, Charterhouse Square, London, UK.
Kyriaki S AlatzoglouSection of Genetics and Epigenetics in Health and Disease, Genetics and Genomic Medicine Programme, UCL Institute of Child Health, London, UK.
José W SaldanhaDivision of Mathematical Biology, National Institute for Medical Research, London, UK.
Angelica GualtieriCentre for Endocrinology, William Harvey Research Institute, Barts and the London School of Medicine and Dentistry, Queen Mary University of London, John Vane Science Centre, Charterhouse Square, London, UK.
Ajay ThankamonyUniversity of Cambridge, Addenbrookes Hospital, Cambridge, UK.
Ieuan HughesUniversity of Cambridge, Addenbrookes Hospital, Cambridge, UK.
Sharron TownshendPrincess Margaret Hospital for Children, Subiaco, Western Australia, Australia.
Juan-Pedro Martinez-BarberaNeural Development Unit, UCL Institute of Child Health, London, UK.
Pierre-Marc BoulouxCentre for Neuroendocrinology, Royal Free Hospital and University College Medical School, University College London, London, UK.
Mehul T DattaniSection of Genetics and Epigenetics in Health and Disease, Genetics and Genomic Medicine Programme, UCL Institute of Child Health, London, UK. Electronic address: m.dattani@ucl.ac.uk.
University College London · GBQueen Mary University of London · GBThe Royal Free Hospital · GBUniversity of Cambridge · GBGarvan Institute of Medical Research · AUInstitute of Child Health · INNational Institute for Health Research · GBPrincess Margaret Hospital for Children · AU

Funding

Medical Research Council MR/M000125/1Wellcome Trust 084361Wellcome Trust 086545
6 · The paper itself

Abstract

KAL1 is implicated in 5% of Kallmann syndrome cases, a disorder which genotypically overlaps with septo-optic dysplasia (SOD). To date, a reporter-based assay to assess the functional consequences of KAL1 mutations is lacking. We aimed to develop a luciferase assay for novel application to functional assessment of rare KAL1 mutations detected in a screen of 422 patients with SOD. Quantitative analysis was performed using L6-myoblasts stably expressing FGFR1, transfected with a luciferase-reporter vector containing elements of the FGF-responsive osteocalcin promoter. The two variants assayed [p.K185N, p.P291T], were detected in three females with SOD (presenting with optic nerve hypoplasia, midline and pituitary defects). Our novel assay revealed significant decreases in transcriptional activity [p.K185N: 21% (p < 0.01); p.P291T: 40% (p < 0.001)]. Our luciferase-reporter assay, developed for assessment of KAL1 mutations, determined that two variants in females with hypopituitarism/SOD are loss-of-function; demonstrating that this assay is suitable for quantitative assessment of mutations in this gene.

Indexed as

Polymorphism, Single NucleotideAnimalsChlorocebus aethiopsCOS CellsExtracellular Matrix ProteinsFemaleHumansIn Vitro TechniquesLuciferasesModels, MolecularNerve Tissue ProteinsPedigreePituitary GlandSepto-Optic DysplasiaANOS1 protein, humanExtracellular Matrix ProteinsLuciferasesNerve Tissue ProteinsFemalesKAL1Kallmann syndromeLuciferase assaySepto-optic dysplasia

Identifiers

PMID26375424
PMCPMC4646839
OpenAlexW1943110517

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.