Evidence map›Paper›PMID 26373937›Full record

ArticlePlanta2016

Transcriptome profiling of postharvest strawberry fruit in response to exogenous auxin and abscisic acid.

Jingxin Chen, Linchun Mao, Wenjing Lu, Tiejin Ying, Zisheng Luo

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
11.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 114 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jingxin ChenCollege of Biosystems Engineering and Food Science, Zhejiang Key Laboratory of Agro-Food Processing, Fuli Institute of Food Science, Zhejiang University, Hangzhou, 310058, China. 11213034@zju.edu.cn.
Linchun MaoCollege of Biosystems Engineering and Food Science, Zhejiang Key Laboratory of Agro-Food Processing, Fuli Institute of Food Science, Zhejiang University, Hangzhou, 310058, China. linchun@zju.edu.cn.
Wenjing LuCollege of Biosystems Engineering and Food Science, Zhejiang Key Laboratory of Agro-Food Processing, Fuli Institute of Food Science, Zhejiang University, Hangzhou, 310058, China.
Tiejin YingCollege of Biosystems Engineering and Food Science, Zhejiang Key Laboratory of Agro-Food Processing, Fuli Institute of Food Science, Zhejiang University, Hangzhou, 310058, China.
Zisheng LuoCollege of Biosystems Engineering and Food Science, Zhejiang Key Laboratory of Agro-Food Processing, Fuli Institute of Food Science, Zhejiang University, Hangzhou, 310058, China.
Zhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionAuxin and abscisic acid regulate strawberry fruit ripening and senescence through cross-talk of their signal transduction pathways that further modulate the structural genes related to physico-chemical properties of fruit. The physiological and transcriptomic changes in harvested strawberry fruits in responses to IAA, ABA and their combination were analyzed. Exogenous IAA delayed the ripening process of strawberries after harvest while ABA promoted the postharvest ripening. However, treatment with a combination of IAA and ABA did not slow down nor accelerate the postharvest ripening in the strawberry fruits. At the molecular level, exogenous IAA up regulated the expressions of genes related to IAA signaling, including AUX/IAA, ARF, TOPLESS and genes encoding E3 ubiquitin protein ligase and annexin, and down regulated genes related to pectin depolymerization, cell wall degradation, sucrose and anthocyanin biosyntheses. In contrast, exogenous ABA induced genes related to fruit softening, and genes involved in signaling pathways including SKP1, HSPs, CK2, and SRG1. Comparison of transcriptomes in responses to individual treatments with IAA or ABA or the combination revealed that there were cooperative and antagonistic actions between IAA and ABA in fruit. However, 17% of the differentially expressed unigenes in response to the combination of IAA and ABA were unique and were not found in those unigenes responding to either IAA or ABA alone. The analyses also found that receptor-like kinases and ubiquitin ligases responded to both IAA and ABA, which seemed to play a pivotal role in both hormones' signaling pathways and thus might be the cross-talk points of both hormones.

Indexed as

TranscriptomeAbscisic AcidDown-RegulationFragariaFruitGene Expression ProfilingGene Expression Regulation, PlantIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsSignal TransductionSucroseAbscisic AcidIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsSucroseAbscisic acidAuxinFragaria × ananassaPostharvest senescenceSignal transductionTranscriptome

Identifiers

PMID26373937
OpenAlexW1680274197

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.