Evidence map›Paper›PMID 26373456›Full record

ArticleMolecular carcinogenesis2016

Autophagy levels are elevated in barrett's esophagus and promote cell survival from acid and oxidative stress.

Jianping Kong, Kelly A Whelan, Dorottya Laczkó, Brendan Dang, Angeliz Caro Monroig, Ali Soroush, John Falcone, Ravi K Amaravadi, Anil K Rustgi, Gregory G Ginsberg and 3 more

Open access · greenAbstract read
In one paragraph

Article in Molecular carcinogenesis, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

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  6. Alterations in the CaExploration of targeted anti-tumor therapy · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Jianping KongDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Kelly A WhelanDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Dorottya LaczkóDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Brendan DangDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Angeliz Caro MonroigDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Ali SoroushDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
John FalconeDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Ravi K AmaravadiDivision of Hematology/Oncology, University of Pennsylvania, Philadelphia, Pennsylvania.
Anil K RustgiDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Gregory G GinsbergDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Gary W FalkDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
Hiroshi NakagawaDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania.
John P LynchDivision of Gastroenterology, University of Pennsylvania, Philadelphia, Pennsylvania. lynchj@mail.med.upenn.edu.
Hospital of the University of Pennsylvania · USUniversity of Pennsylvania · US

Funding

Targeting the MAP and PI3 Kinase Pathways in MelanomaP01CA114046 · NCI · WISTAR INSTITUTE · PI MURPHY, MAUREEN E. · 2008 to 2023
$37.1M
TRANSGENIC AND CHIMERIC MOUSE COREP30DK050306 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI REBECCA G WELLS · 1997 to 2026
$32.5M
Transformed Esophageal Epithelial Cells and the Tumor MicroenvironmentP01CA098101 · NCI · UNIVERSITY OF PENNSYLVANIA · PI HIBSHOOSH, HANINA · 2003 to 2023
$31.7M
Whole Exome Approaches for Esophageal Adenocarcinoma Susceptibility GenesU54CA163060 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI CHAK, AMITABH, GUDA, KISHORE · 2011 to 2022
$14.0M
Weight loss-induced Microbiome and Adipokine Changes in Barrett's EsophagusU54CA163004 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ABRAMS, JULIAN, RUSTGI, ANIL K · 2011 to 2022
$12.5M
HLTF gene silencing: a novel determinant of sensitivity to autophagy inhibitionR01CA169134 · NCI · UNIVERSITY OF PENNSYLVANIA · PI AMARAVADI, RAVI K · 2013 to 2017
$1.7M
Modeling oxidative stress and DNA damage using GI organotypic culture systemsU18TR000536 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI LYNCH, JOHN P. · 2012 to 2013
$821k
Mouse models for esophageal Cox-2 oxidative stress and DNA damageK26OD012097 · OD · UNIVERSITY OF PENNSYLVANIA · PI LYNCH, JOHN P. · 2013 to 2017
$737k
The functional role of mitophagy in esophageal cell biologyK01DK103953 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI WHELAN, KELLY A · 2015 to 2019
$637k
Integrative mouse pathobiology: GI epithelial biology and geneticsK26OD011179 · OD · UNIVERSITY OF PENNSYLVANIA · PI NAKAGAWA, HIROSHI · 2012 to 2015
$402k
Integrative mouse pathobiology: GI epithelial biology and geneticsK26RR032714 · NCRR · UNIVERSITY OF PENNSYLVANIA · PI NAKAGAWA, HIROSHI · 2011 to 2011
$87k
NCATS NIH HHS U18 TR000536NCI NIH HHS P01 CA098101NCI NIH HHS P01 CA114046NCI NIH HHS R01 CA169134NCI NIH HHS U54 CA163004NCI NIH HHS U54 CA163060NCRR NIH HHS K26 RR032714NIDDK NIH HHS K01 DK103953NIDDK NIH HHS P30 DK050306NIH HHS K26 OD011179NIH HHS K26 OD012097
6 · The paper itself

Abstract

Autophagy is a highly conserved mechanism that is activated during cellular stress. We hypothesized that autophagy may be induced by acid reflux, which causes injury, and inflammation, and therefore, contributes to the pathogenesis of Barrett's esophagus (BE) and esophageal adenocarcinoma (EAC). Currently, the role of autophagy in BE and EAC is poorly studied. We quantitatively define autophagy levels in human BE cell lines, a transgenic mouse model of BE, and human BE, and EAC biopsies. Human non-dysplastic BE had the highest basal number of autophagic vesicles (AVs), while AVs were reduced in normal squamous cells and dysplastic BE cells, and nearly absent in EAC. To demonstrate a functional role for autophagy in BE pathogenesis, normal squamous (STR), non-dysplastic BE (CPA), dysplastic BE (CPD), and EAC (OE19) cell lines were exposed to an acid pulse (pH 3.5) followed by incubation in the presence or absence of chloroquine, an autophagy inhibitor. Acid exposure increased reactive oxygen species (ROS) levels in STR and CPA cells. Chloroquine alone had a small impact on intracellular ROS or cell survival. However, combination of chloroquine with the acid pulse resulted in a significant increase in ROS levels at 6 h in STR and CPA cells, and increased cell death in all cell lines. These findings establish increased numbers of AVs in human BE compared to normal squamous or EAC, and suggest that autophagy functions to improve cell survival after acid reflux injury. Autophagy may thus play a critical role in BE pathogenesis and progression. © 2015 Wiley Periodicals, Inc.

Indexed as

AcidsAdenocarcinomaAnimalsAutophagyBarrett EsophagusCell LineCell SurvivalChloroquineDisease Models, AnimalDisease ProgressionEsophageal NeoplasmsHumansMiceOxidative StressReactive Oxygen SpeciesAcidsChloroquineReactive Oxygen SpeciesautophagyBarrett's esophaguschloroquineesophageal adenocarcinomaoxidative stress

Identifiers

PMID26373456
PMCPMC4794420
OpenAlexW2155288852

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.