Evidence map›Paper›PMID 26371508›Full record

ArticleeLife2015

The splicing regulators Esrp1 and Esrp2 direct an epithelial splicing program essential for mammalian development.

Thomas W Bebee, Juw Won Park, Katherine I Sheridan, Claude C Warzecha, Benjamin W Cieply, Alex M Rohacek, Yi Xing, Russ P Carstens

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 1 synthesis or guideline pooled it, 172 citations in OpenAlex.

  1. Pooled it
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  19. Functional analysis ofbioRxiv : the preprint server for biology · 2024
    Article
  20. Review

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Thomas W BebeeDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Juw Won ParkDepartment of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, Los Angeles, United States.
Katherine I SheridanDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Claude C WarzechaDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Benjamin W CieplyDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Alex M RohacekDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Yi XingDepartment of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, Los Angeles, United States.
Russ P CarstensDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
University of Pennsylvania · USUniversity of California, Los Angeles · US

Funding

TRANSGENIC AND CHIMERIC MOUSE COREP30DK050306 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI Ken Hashigiwa Cadwell · 1997 to 2026
$32.5M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008216 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI EPSTEIN, DOUGLAS J · 1987 to 2023
$8.3M
The Role of Hyaluronic Acid Receptors in Tendon HealingP30AR050950 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI ELLIOTT, DAWN M · 2006 to 2015
$6.2M
Understanding molecular mechanisms underlying the formation of the blue nevus andP30AR057217 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI STANLEY, JOHN R · 2009 to 2013
$3.2M
VARIATION AND REGULATION OF ALTERNATIVE SPLICING IN HUMAN TRANSCRIPTOMESR01GM088342 · NIGMS · UNIVERSITY OF IOWA · PI XING, YI · 2010 to 2020
$2.9M
Roles of Epithelial Splicing Regulatory Proteins in craniofacial developmentR01DE024749 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2015 to 2019
$2.9M
Esrp regulated programs of alternative splicing in skin development and functionR01AR066741 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2015 to 2019
$1.9M
Functions of Epithelial Splicing Regulatory Proteins and their role in the EMTR01GM088809 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2009 to 2013
$1.5M
Integrative Analysis of Public RNA-seq RepositoriesR01GM105431 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ZHOU, XIANGHONG JASMINE · 2013 to 2016
$1.3M
Roles of Epithelial Splicing Regulatory Proteins in craniofacial developmentR56DE024749 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2014 to 2014
$462k
Esrp regulated programs of alternative splicing in skin development and functionR56AR066741 · NIAMS · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2014 to 2014
$370k
ESRP regulated alternative splicing in EMT/MET and kidney developmentF32DK098917 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI BEBEE, THOMAS W · 2013 to 2014
$102k
NIAMS NIH HHS P30 AR050950NIAMS NIH HHS P30 AR057217NIAMS NIH HHS R01 AR066741NIAMS NIH HHS R56 AR066741NIDCR NIH HHS R01 DE024749NIDCR NIH HHS R56 DE024749NIDDK NIH HHS F32 DK098917NIDDK NIH HHS F32DK098917NIDDK NIH HHS P30 DK050306NIDDK NIH HHS T32DK700638NIGMS NIH HHS R01 GM088342NIGMS NIH HHS R01 GM088809NIGMS NIH HHS R01 GM105431NIGMS NIH HHS T32 GM008216
6 · The paper itself

Abstract

Tissue- and cell-type-specific regulators of alternative splicing (AS) are essential components of posttranscriptional gene regulation, necessary for normal cellular function, patterning, and development. Mice with ablation of Epithelial splicing regulatory protein (Esrp1) develop cleft lip and palate. Loss of both Esrp1 and its paralog Esrp2 results in widespread developmental defects with broad implications to human disease. Deletion of the Esrps in the epidermis revealed their requirement for establishing a proper skin barrier, a primary function of epithelial cells comprising the epidermis. We profiled the global Esrp-mediated splicing regulatory program in epidermis, which revealed large-scale programs of epithelial cell-type-specific splicing required for epithelial cell functions. These mice represent a valuable model for evaluating the essential role for AS in development and function of epithelial cells, which play essential roles in tissue homeostasis in numerous organs, and provide a genetic tool to evaluate important functional properties of epithelial-specific splice variants in vivo.

Indexed as

AnimalsAnimal StructuresEpithelial CellsFemaleGene DeletionGene Expression ProfilingMaleMice, Inbred BALB CMice, Inbred C57BLRNA-Binding ProteinsESRP1 protein, mouseESRP2 protein, mouseRNA-Binding Proteinsalternative splicingchromosomescleft lip associated with cleft palate (CL/P)developmental biologyepithelial barrier defectepithelial splicing regulatory proteinsgenesmousemouse gene knockoutstem cells

Identifiers

PMID26371508
PMCPMC4566030
OpenAlexW2176968637

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.