Evidence map›Paper›PMID 26370091›Full record

ArticleThe Journal of biological chemistry2015

Kinetic contributions to gating by interactions unique to N-methyl-D-aspartate (NMDA) receptors.

William F Borschel, Kirstie A Cummings, LeeAnn K Tindell, Gabriela K Popescu

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. The positive allosteric modulator GNE-9278 increases gating, conductance, and CaNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026
    Article
  2. Article
  3. Structural insights into NMDA receptor pharmacology.Biochemical Society transactions · 2023
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. NMDA Receptors in the Central Nervous System.Methods in molecular biology (Clifton, N.J.) · 2017
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

William F BorschelFrom the Department of Biochemistry, University at Buffalo, State University of New York, Buffalo, New York 14214.
Kirstie A CummingsFrom the Department of Biochemistry, University at Buffalo, State University of New York, Buffalo, New York 14214.
LeeAnn K TindellFrom the Department of Biochemistry, University at Buffalo, State University of New York, Buffalo, New York 14214.
Gabriela K PopescuFrom the Department of Biochemistry, University at Buffalo, State University of New York, Buffalo, New York 14214 popescu@buffalo.edu.ORCID http://orcid.org/0000-0003-4658-2002

Funding

Probing allosteric surfaces of NMDA receptorsR01NS052669 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI POPESCU, GABRIELA K · 2006 to 2015
$3.4M
Gating Mechanism of NMDA ReceptorsR01NS108750 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI POPESCU, GABRIELA K · 2019 to 2023
$1.5M
GATING KINETICS OF GLYCINERGIC NMDA RECEPTORSF31NS086765 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI CUMMINGS, KIRSTIE ALYSSA · 2013 to 2015
$77k
REARRANGMENTS AT THE NMDA RECEPTOR LIGAND BINDING DOMAIN INTERFACEF31NS071782 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI BORSCHEL, WILLIAM FRANCIS · 2010 to 2011
$52k
NINDS NIH HHS F31 NS071782NINDS NIH HHS F31NS071782NINDS NIH HHS F31 NS086765NINDS NIH HHS F31NS086765NINDS NIH HHS R01 NS052669NINDS NIH HHS R01NS052669NINDS NIH HHS R01 NS108750
6 · The paper itself

Abstract

Among glutamate-gated channels, NMDA receptors produce currents that subside with unusually slow kinetics, and this feature is essential to the physiology of central excitatory synapses. Relative to the homologous AMPA and kainate receptors, NMDA receptors have additional intersubunit contacts in the ligand binding domain that occur at both conserved and non-conserved sites. We examined GluN1/GluN2A single-channel currents with kinetic analyses and modeling to probe these class-specific intersubunit interactions for their role in glutamate binding and receptor gating. We found that substitutions that eliminate such interactions at non-conserved sites reduced stationary gating, accelerated deactivation, and imparted sensitivity to aniracetam, an AMPA receptor-selective positive modulator. Abolishing unique contacts at conserved sites also reduced stationary gating and accelerated deactivation. These results show that contacts specific to NMDA receptors, which brace the heterodimer interface within the ligand binding domain, stabilize actively gating receptor conformations and result in longer bursts and slower deactivations. They support the view that the strength of the heterodimer interface modulates gating in both NMDA and non-NMDA receptors and that unique interactions at this interface are responsible in part for basic differences between the kinetics of NMDA and non-NMDA currents at glutamatergic synapses.

Indexed as

AnimalsBinding SitesBiological TransportCrystallography, X-RayGene ExpressionHEK293 CellsHumansIon Channel GatingLigandsMembrane PotentialsMolecular Docking SimulationMolecular Dynamics SimulationNootropic AgentsPatch-Clamp TechniquesProtein BindingProtein MultimerizationaniracetamLigandsNootropic AgentsPyrrolidinonesReceptors, N-Methyl-D-AspartateRecombinant Proteinsactivation mechanismgatingionotropic glutamate receptorkineticsN-methyl-d-aspartate receptor (NMDA receptor, NMDAR)receptor structure-functionsynaptic transmission

Identifiers

PMID26370091
PMCPMC4646337

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.