Evidence map›Paper›PMID 26370089›Full record

ArticleThe Journal of biological chemistry2015

Pore hydration states of KcsA potassium channels in membranes.

Joseph R Blasic, David L Worcester, Klaus Gawrisch, Philip Gurnev, Mihaela Mihailescu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Water inside the Selectivity Filter of a KJournal of the American Chemical Society · 2024
    Article
  3. Article
  4. Special issue for Klaus Gawrisch.Biophysical journal · 2023
    Article
  5. High-Resolution Structures of KHandbook of experimental pharmacology · 2021
    Article
  6. Review
  7. Article
  8. Why Nature Chose Potassium.Journal of molecular evolution · 2019
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 1 country.

Joseph R BlasicFrom the Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland 20850.
David L Worcesterthe Department of Physiology and Biophysics, University of California, Irvine, California 92697, the National Institute of Standards and Technology, Center for Neutron Research, Gaithersburg, Maryland 20899.
Klaus Gawrischthe Laboratory of Membrane Biochemistry and Biophysics, National Institute on Alcohol Abuse and Alcoholism, National Institutes of Health, Bethesda, Maryland 20892.
Philip Gurnevthe Physics Department, University of Massachusetts, Amherst, Massachusetts 01003, and From the Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland 20850.
Mihaela MihailescuFrom the Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland 20850, emihailescu@ibbr.umd.edu.
Advanced Bioscience Laboratories (United States) · USEunice Kennedy Shriver National Institute of Child Health and Human Development · USInstitute for Bioscience and Biotechnology ResearchNational Institutes of Health · USNIST Center for Neutron Research · US

Funding

NMR Investigations Of Cell Membrane StructureZIAAA000003 · NIAAA · NATIONAL INSTITUTE ON ALCOHOL ABUSE AND ALCOHOLISM · PI GAWRISCH, KLAUS · 2009 to 2020
$23.2M
Project 3: Structural Studies of Voltage-Gated Potassium Channels as FunctionP01GM086685 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI WORCESTER, DAVID · 2009 to 2013
$6.7M
NIGMS NIH HHS GM86685NIGMS NIH HHS P01 GM086685
6 · The paper itself

Abstract

Water-filled hydrophobic cavities in channel proteins serve as gateways for transfer of ions across membranes, but their properties are largely unknown. We determined water distributions along the conduction pores in two tetrameric channels embedded in lipid bilayers using neutron diffraction: potassium channel KcsA and the transmembrane domain of M2 protein of influenza A virus. For the KcsA channel in the closed state, the distribution of water is peaked in the middle of the membrane, showing water in the central cavity adjacent to the selectivity filter. This water is displaced by the channel blocker tetrabutyl-ammonium. The amount of water associated with the channel was quantified, using neutron diffraction and solid state NMR. In contrast, the M2 proton channel shows a V-shaped water profile across the membrane, with a narrow constriction at the center, like the hourglass shape of its internal surface. These two types of water distribution are therefore very different in their connectivity to the bulk water. The water and protein profiles determined here provide important evidence concerning conformation and hydration of channels in membranes and the potential role of pore hydration in channel gating.

Indexed as

ProtonsBacterial ProteinsCell MembraneEscherichia coliGene ExpressionInfluenza A virusIon Channel GatingIon TransportLipid BilayersModels, MolecularPhosphatidylcholinesPhosphatidylglycerolsPotassiumPotassium Channel BlockersPotassium ChannelsProtein Conformation1-palmitoyl-2-oleoylglycero-3-phosphoglycerol1-palmitoyl-2-oleoylphosphatidylcholineBacterial ProteinsLipid BilayersM2 protein, Influenza A virusPhosphatidylcholinesPhosphatidylglycerolsPotassiumPotassium Channel BlockersPotassium Channelsprokaryotic potassium channelProtonsQuaternary Ammonium CompoundsRecombinant ProteinstetrabutylammoniumViral Matrix ProteinsViroporin ProteinsWaterinfluenza virusion channelsKcsAlipid bilayerM2neutron diffractionnuclear magnetic resonance (NMR)potassium channel

Identifiers

PMID26370089
PMCPMC4646329
OpenAlexW2196739769

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.