Evidence map›Paper›PMID 26370076›Full record

ArticleThe Journal of biological chemistry2015

Self-assembly is prerequisite for catalysis of Fe(II) oxidation by catalytically active subunits of ferritin.

Kourosh Honarmand Ebrahimi, Peter-Leon Hagedoorn, Wilfred R Hagen

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Designability of Aromatic Interaction Networks atMolecules (Basel, Switzerland) · 2017
    Article
  7. Article
  8. Ferritin Assembly in Enterocytes of Drosophila melanogaster.International journal of molecular sciences · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kourosh Honarmand EbrahimiFrom the Department of Biotechnology, Delft University of Technology, 2628 BC Delft, The Netherlands k.h.ebrahimi@tudelft.nl.
Peter-Leon HagedoornFrom the Department of Biotechnology, Delft University of Technology, 2628 BC Delft, The Netherlands.
Wilfred R HagenFrom the Department of Biotechnology, Delft University of Technology, 2628 BC Delft, The Netherlands w.r.hagen@tudelft.nl.
Delft University of Technology · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fe(III) storage by ferritin is an essential process of the iron homeostasis machinery. It begins by translocation of Fe(II) from outside the hollow spherical shape structure of the protein, which is formed as the result of self-assembly of 24 subunits, to a di-iron binding site, the ferroxidase center, buried in the middle of each active subunit. The pathway of Fe(II) to the ferroxidase center has remained elusive, and the importance of self-assembly for the functioning of the ferroxidase center has not been investigated. Here we report spectroscopic and metal ion binding studies with a mutant of ferritin from Pyrococcus furiosus (PfFtn) in which self-assembly was abolished by a single amino acid substitution. We show that in this mutant metal ion binding to the ferroxidase center and Fe(II) oxidation at this site was obliterated. However, metal ion binding to a conserved third site (site C), which is located in the inner surface of each subunit in the vicinity of the ferroxidase center and is believed to be the path for Fe(II) to the ferroxidase center, was not disrupted. These results are the basis of a new model for Fe(II) translocation to the ferroxidase center: self-assembly creates channels that guide the Fe(II) ions toward the ferroxidase center directly through the protein shell and not via the internal cavity and site C. The results may be of significance for understanding the molecular basis of ferritin-related disorders such as neuroferritinopathy in which the 24-meric structure with 432 symmetry is distorted.

Indexed as

Amino Acid SubstitutionArchaeal ProteinsBiocatalysisCatalytic DomainCations, DivalentCeruloplasminFerritinsGene ExpressionIronKineticsModels, MolecularMutationOxidation-ReductionProtein BindingProtein MultimerizationProtein Structure, SecondaryArchaeal ProteinsCations, DivalentCeruloplasminFerritinsIronProtein SubunitsRecombinant Proteinsenzyme kineticsenzymologyferritinferroxidaseiron metabolismisothermal titration calorimetry (ITC)protein self-assembly

Identifiers

PMID26370076
PMCPMC4646333
OpenAlexW2243762995

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.