Evidence map›Paper›PMID 26367501›Full record

ArticlePharmacogenetics and genomics2015

Accurate interrogation of FCGR3A rs396991 in European and Asian populations using a widely available TaqMan genotyping method.

Kay E Murphy, Heather A Niederer, Karen S King, Elizabeth C Harris, Sarah M Glass, Charles J Cox

Abstract read
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Article in Pharmacogenetics and genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kay E MurphyaGenetics bBiopharm Discovery, GlaxoSmithKline, Stevenage, UK cGenetics, GlaxoSmithKline, Research Triangle Park, North Carolina, USA.
Heather A Niederer
Karen S King
Elizabeth C Harris
Sarah M Glass
Charles J Cox

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A polymorphism in the receptor for the Fc region of IgG, Fc γ-receptor IIIa (FcγRIIIa, FCGR3A rs396991), has been inconsistently shown in the literature to have an effect on response to monoclonal antibody therapy in several indications. The rs396991 (T/G) polymorphism leads to an F176V substitution and increased affinity for IgG. This variant has proven difficult to genotype accurately, primarily because of extensive homology between the FCGR3A and FCGR3B genes. We have shown that rs396991 can be genotyped by PCR amplification, followed by direct Sanger sequencing of the product, without coamplification of FCGR3B, and that the rs396991 TaqMan assay (C__25815666_10) agrees with Sanger sequencing results in 100% of European and Asian samples tested, but it has a small error rate in African and American populations. C__25815666_10 is therefore suitable to interrogate rs396991 in studies involving Europeans and Asians; however for other populations, the default genotyping method should be PCR followed by Sanger sequencing.

Indexed as

Polymorphism, Single NucleotideAmino Acid SubstitutionAsian PeopleGenotypeGenotyping TechniquesHeterozygoteHomozygoteHumansPolymerase Chain ReactionReceptors, IgGSequence Analysis, DNAWhite PeopleFCGR3A protein, humanReceptors, IgG

Identifiers

PMID26367501
PMCPMC4596484

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.