Evidence map›Paper›PMID 26364863›Full record

ArticleNeuroImage2016

The Function Biomedical Informatics Research Network Data Repository.

David B Keator, Theo G M van Erp, Jessica A Turner, Gary H Glover, Bryon A Mueller, Thomas T Liu, James T Voyvodic, Jerod Rasmussen, Vince D Calhoun, Hyo Jong Lee and 16 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in NeuroImage, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
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30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

David B KeatorDepartment of Psychiatry and Human Behavior, University of California, Irvine, CA, USA. Electronic address: dbkeator@uci.edu.
Theo G M van ErpDepartment of Psychiatry and Human Behavior, University of California, Irvine, CA, USA.
Jessica A TurnerMind Research Network, Albuquerque, NM, USA; Department of Psychiatry and Neuroscience Institute, Georgia State University, Atlanta, GA, USA.
Gary H GloverDepartment of Radiology, Stanford University, Stanford, CA, USA.
Bryon A MuellerDepartment of Psychiatry, University of Minnesota, Minneapolis, MN, USA.
Thomas T LiuCenter for Functional MRI, University of California, San Diego, CA, USA.
James T VoyvodicBrain Imaging and Analysis Center, Duke University Medical Center, Durham, NC, USA.
Jerod RasmussenDepartment of Psychiatry and Human Behavior, University of California, Irvine, CA, USA.
Vince D CalhounMind Research Network, Albuquerque, NM, USA; Department of ECE, University of New Mexico, Albuquerque, NM, USA; Department of Psychiatry, University of New Mexico, Albuquerque, NM, USA.
Hyo Jong LeeDepartment of Computer Science and Engineering, Chonbuk National University, Republic of Korea.
Arthur W TogaLaboratory of Neuro Imaging, University of Southern California, Los Angeles, USA; Institute for Neuroimaging and Informatics, University of Southern California, Los Angeles, USA; Keck School of Medicine of USC, University of Southern California, Los Angeles, USA.
Sarah McEwenDepartment of Psychology, University of California, Los Angeles, CA, USA.
Judith M FordDepartment of Psychiatry, University of California, San Francisco, CA, USA; Brain Imaging and EEG Laboratory, University of California, San Francisco, CA, USA; San Francisco VA Medical Center, San Francisco, CA, USA.
Daniel H MathalonDepartment of Psychiatry, University of California, San Francisco, CA, USA; Brain Imaging and EEG Laboratory, University of California, San Francisco, CA, USA; San Francisco VA Medical Center, San Francisco, CA, USA.
Michele DiazDepartment of Psychology, Penn State University, University Park, PA, USA.
Daniel S O'LearyDepartment of Psychiatry, University of Iowa, Iowa City, IA, USA.
H Jeremy BockholtDepartment of ECE, University of New Mexico, Albuquerque, NM, USA; Department of Psychiatry, University of Iowa, Iowa City, IA, USA.
Syam GaddeBrain Imaging and Analysis Center, Duke University Medical Center, Durham, NC, USA.
Adrian PredaDepartment of Psychiatry and Human Behavior, University of California, Irvine, CA, USA.
Cynthia G WibleDepartment of Psychiatry, Harvard Medical School, Boston, MA, USA; Brockton VAMC, Boston, MA, USA.
Hal S SternDepartment of Statistics, University of California, Irvine, CA, USA.
Aysenil BelgerDepartment of Psychiatry, University of North Carolina at Chapel Hill, NC, USA; Department of Psychology, University of North Carolina at Chapel Hill, NC, USA.
Gregory McCarthyDepartment of Psychology, Yale University, New Haven, CT, USA.
Burak OzyurtDepartment of Psychiatry, University of California, San Diego, CA, USA.
Steven G PotkinDepartment of Psychiatry and Human Behavior, University of California, Irvine, CA, USA.
FBIRN

Funding

FUNCTION BIRNU24RR021992 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI POTKIN, STEVEN G · 2006 to 2010
$25.0M
BIO-INFORMATICS RESEARCH NETWORK COORDINATING CENTER (BIRN-CC)U24RR025736 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KESSELMAN, CARL · 2009 to 2011
$15.0M
Multivariate methods for identifying multitask/multimodal brain imaging biomarkersR01EB006841 · NIBIB · THE MIND RESEARCH NETWORK · PI VINCE D CALHOUN, Sergey Plis · 2007 to 2026
$9.8M
Preclinical CoreU54HD079124 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MOY, SHERYL S · 2013 to 2019
$8.0M
Unified multivariate data-driven solutions for static and dynamic brain connectivityR01EB020407 · NIBIB · THE MIND RESEARCH NETWORK · PI ADALI, TULAY, CALHOUN, VINCE D · 2015 to 2018
$2.7M
Biological Mechanisms of Enhanced Neuroplasticity in First-Episode SchizophreniaK01MH099431 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MCEWEN, SARAH CHRISTINE · 2012 to 2016
$829k
NCRR NIH HHS 1 U24 RR021992NCRR NIH HHS 1 U24 RR025736-01NCRR NIH HHS U24 RR021992NCRR NIH HHS U24 RR025736NIBIB NIH HHS R01 EB006841NIBIB NIH HHS R01 EB020407NICHD NIH HHS U54 HD079124NIMH NIH HHS K01 MH099431
6 · The paper itself

Abstract

The Function Biomedical Informatics Research Network (FBIRN) developed methods and tools for conducting multi-scanner functional magnetic resonance imaging (fMRI) studies. Method and tool development were based on two major goals: 1) to assess the major sources of variation in fMRI studies conducted across scanners, including instrumentation, acquisition protocols, challenge tasks, and analysis methods, and 2) to provide a distributed network infrastructure and an associated federated database to host and query large, multi-site, fMRI and clinical data sets. In the process of achieving these goals the FBIRN test bed generated several multi-scanner brain imaging data sets to be shared with the wider scientific community via the BIRN Data Repository (BDR). The FBIRN Phase 1 data set consists of a traveling subject study of 5 healthy subjects, each scanned on 10 different 1.5 to 4 T scanners. The FBIRN Phase 2 and Phase 3 data sets consist of subjects with schizophrenia or schizoaffective disorder along with healthy comparison subjects scanned at multiple sites. In this paper, we provide concise descriptions of FBIRN's multi-scanner brain imaging data sets and details about the BIRN Data Repository instance of the Human Imaging Database (HID) used to publicly share the data.

Indexed as

Databases, FactualMedical InformaticsAdolescentAdultAgedBiomedical ResearchFemaleHealthy VolunteersHumansInformation DisseminationMagnetic Resonance ImagingMaleMiddle AgedNeuroimagingPsychotic DisordersReference Values

Identifiers

PMID26364863
PMCPMC4651841

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.