Evidence map›Paper›PMID 26364851›Full record

ArticleThe Journal of biological chemistry2015

Structure of Human B12 Trafficking Protein CblD Reveals Molecular Mimicry and Identifies a New Subfamily of Nitro-FMN Reductases.

Kazuhiro Yamada, Carmen Gherasim, Ruma Banerjee, Markos Koutmos

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Mitochondrial depolarization stabilizes the vitamin BProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Cobalt-Sulfur Coordination Chemistry Drives BJournal of the American Chemical Society · 2023
    Article
  4. Vitamin BMolecules (Basel, Switzerland) · 2022
    Review
  5. Bioprocess Strategies for Vitamin BBioengineering (Basel, Switzerland) · 2022
    Review
  6. Review
  7. Redox-Linked Coordination Chemistry Directs Vitamin BAccounts of chemical research · 2021
    Article
  8. Article
  9. Article
  10. An Interprotein Co-S Coordination Complex in the BJournal of the American Chemical Society · 2020
    Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kazuhiro YamadaFrom the Department of Biochemistry, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814 and.
Carmen Gherasimthe Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, Michigan 48109-0600.
Ruma Banerjeethe Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, Michigan 48109-0600 rbanerje@umich.edu.
Markos KoutmosFrom the Department of Biochemistry, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814 and markos.koutmos@usuhs.edu.

Funding

REACTION MECHANISMS OF MAMMALIAN B12-DEPENDENT ENZYMESR01DK045776 · NIDDK · UNIVERSITY OF NEBRASKA LINCOLN · PI RUMA V BANERJEE · 1998 to 2026
$9.7M
REACTION MECHANISMS OF COBALAMIN-DEPENDENT ENZYMESR29DK045776 · NIDDK · UNIVERSITY OF NEBRASKA LINCOLN · PI BANERJEE, RUMA V · 1993 to 1997
–
NIDDK NIH HHS DK45776NIDDK NIH HHS R01 DK045776
6 · The paper itself

Abstract

In mammals, B12 (or cobalamin) is an essential cofactor required by methionine synthase and methylmalonyl-CoA mutase. A complex intracellular pathway supports the assimilation of cobalamin into its active cofactor forms and delivery to its target enzymes. MMADHC (the methylmalonic aciduria and homocystinuria type D protein), commonly referred to as CblD, is a key chaperone involved in intracellular cobalamin trafficking, and mutations in CblD cause methylmalonic aciduria and/or homocystinuria. Herein, we report the first crystal structure of the globular C-terminal domain of human CblD, which is sufficient for its interaction with MMADHC (the methylmalonic aciduria and homocystinuria type C protein), or CblC, and for supporting the cytoplasmic cobalamin trafficking pathway. CblD contains an α+β fold that is structurally reminiscent of the nitro-FMN reductase superfamily. Two of the closest structural relatives of CblD are CblC, a multifunctional enzyme important for cobalamin trafficking, and the activation domain of methionine synthase. CblD, CblC, and the activation domain of methionine synthase share several distinguishing features and, together with two recently described corrinoid-dependent reductive dehalogenases, constitute a new subclass within the nitro-FMN reductase superfamily. We demonstrate that CblD enhances oxidation of cob(II)alamin bound to CblC and that disease-causing mutations in CblD impair the kinetics of this reaction. The striking structural similarity of CblD to CblC, believed to be contiguous in the cobalamin trafficking pathway, suggests the co-option of molecular mimicry as a strategy for achieving its function.

Indexed as

Mutation5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseAmino Acid MotifsAmino Acid SequenceCrystallography, X-RayCytoplasmFMN ReductaseHomocystinuriaHumansIntracellular Signaling Peptides and ProteinsLigandsLysosomesMitochondrial Membrane Transport ProteinsMolecular MimicryMolecular Sequence DataMutation, Missense5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseFMN ReductaseIntracellular Signaling Peptides and ProteinsLigandsMitochondrial Membrane Transport ProteinsMMADHC protein, humanOxygenVitamin B 12B12 metabolismchaperonecrystal structureintracellular traffickingmetabolic diseaseprotein motif

Identifiers

PMID26364851
PMCPMC4705922

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.