Evidence map›Paper›PMID 26362399›Full record

ArticleOncotarget2015

Dclk1+ small intestinal epithelial tuft cells display the hallmarks of quiescence and self-renewal.

Parthasarathy Chandrakesan, Randal May, Dongfeng Qu, Nathaniel Weygant, Vivian E Taylor, James D Li, Naushad Ali, Sripathi M Sureban, Michael Qante, Timothy C Wang and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
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  5. Article
  6. Review
  7. Intestinal stem cell niche: An upcoming area of immense importance in gastrointestinal disorders.Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology · 2025
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Pleiotropic effects of DCLK1 in cancer and cancer stem cells.Frontiers in molecular biosciences · 2022
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Parthasarathy ChandrakesanDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Randal MayDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Dongfeng QuDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Nathaniel WeygantDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Vivian E TaylorDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
James D LiDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Naushad AliDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Sripathi M SurebanDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Michael QanteKlinikum rechts der Isar, II. Medizinische Klinik, Technische Universität München, Munich, Germany.
Timothy C WangDepartment of Digestive and Liver Diseases, Columbia University Medical Center, New York, NY, USA.
Michael S BronzeDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Courtney W HouchenDepartment of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
University of Oklahoma Health Sciences Center · USCoare Biotechnology (United States) · USColumbia University Irving Medical Center · USTechnical University of Munich · DETranslational Research in Oncology · FR

Funding

Intestinal Stem Cell Consortium Coordinating CenterU01DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2009 to 2018
$6.5M
Limited Competition for the Continuation of the Intestinal Stem Cell Consortium Coordinating CenterU24DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2019 to 2023
$2.3M
Isolation and Characterization of Intestinal Stem Cells Using Novel Markers (RP)U01DK085508 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HOUCHEN, COURTNEY WAYNE · 2009 to 2014
$2.0M
NIDDK NIH HHS U01 DK-085508NIDDK NIH HHS U01 DK085508NIDDK NIH HHS U01 DK085532NIDDK NIH HHS U24 DK085532
6 · The paper itself

Abstract

To date, no discrete genetic signature has been defined for isolated Dclk1+ tuft cells within the small intestine. Furthermore, recent reports on the functional significance of Dclk1+ cells in the small intestine have been inconsistent. These cells have been proposed to be fully differentiated cells, reserve stem cells, and tumor stem cells. In order to elucidate the potential function of Dclk1+ cells, we FACS-sorted Dclk1+ cells from mouse small intestinal epithelium using transgenic mice expressing YFP under the control of the Dclk1 promoter (Dclk1-CreER;Rosa26-YFP). Analysis of sorted YFP+ cells demonstrated marked enrichment (~6000 fold) for Dclk1 mRNA compared with YFP- cells. Dclk1+ population display ~6 fold enrichment for the putative quiescent stem cell marker Bmi1. We observed significantly greater expression of pluripotency genes, pro-survival genes, and quiescence markers in the Dclk1+ population. A significant increase in self-renewal capability (14-fold) was observed in in vitro isolated Dclk1+ cells. The unique genetic report presented in this manuscript suggests that Dclk1+ cells may maintain quiescence, pluripotency, and metabolic activity for survival/longevity. Functionally, these reserve characteristics manifest in vitro, with Dclk1+ cells exhibiting greater ability to self-renew. These findings indicate that quiescent stem-like functionality is a feature of Dclk1-expressing tuft cells.

Indexed as

Cell DifferentiationCell ProliferationAnimalsApoptosisCells, CulturedDoublecortin-Like KinasesEpithelial CellsHumansImmunoenzyme TechniquesIn Situ Hybridization, FluorescenceIntestine, SmallLongevityMiceMice, TransgenicProtein Serine-Threonine KinasesReal-Time Polymerase Chain ReactionDclk1 protein, mouseDoublecortin-Like KinasesProtein Serine-Threonine KinasesRNA, MessengerDclk1pluripotencyquiescenceself-renewal

Identifiers

PMID26362399
PMCPMC4741574
OpenAlexW1783706650

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.