Evidence map›Paper›PMID 26360626›Full record

ArticlePlant biotechnology journal2016

Development of germ-line-specific CRISPR-Cas9 systems to improve the production of heritable gene modifications in Arabidopsis.

Yanfei Mao, Zhengjing Zhang, Zhengyan Feng, Pengliang Wei, Hui Zhang, José Ramón Botella, Jian-Kang Zhu

Open access · bronzeAbstract read
In one paragraph

Article in Plant biotechnology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 224 citations in OpenAlex.

  1. Article
  2. CRISPR/Cas Genome Editing and Its Applications in Cereal Crop Improvement.Plant-environment interactions (Hoboken, N.J.) · 2026
    Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Beyond a few bases: methods for large DNA insertion and gene targeting in plants.The Plant journal : for cell and molecular biology · 2025
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Seedlessness Trait and Genome Editing-A Review.International journal of molecular sciences · 2023
    Review

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Yanfei MaoShanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai, China.
Zhengjing ZhangShanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai, China.
Zhengyan FengShanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai, China.
Pengliang WeiShanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai, China.
Hui ZhangShanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai, China.
José Ramón BotellaSchool of Agriculture and Food Sciences, University of Queensland, Brisbane, Qld, Australia.
Jian-Kang ZhuShanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai, China.
Chinese Academy of Sciences · CNThe University of Queensland · AU

Funding

DNA Demethylation and Transcriptional Gene SilencingR01GM070795 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI ZHU, JIAN-KANG · 2004 to 2015
$4.0M
NIGMS NIH HHS R01 GM070795
6 · The paper itself

Abstract

The Streptococcus-derived CRISPR/Cas9 system is being widely used to perform targeted gene modifications in plants. This customized endonuclease system has two components, the single-guide RNA (sgRNA) for target DNA recognition and the CRISPR-associated protein 9 (Cas9) for DNA cleavage. Ubiquitously expressed CRISPR/Cas9 systems (UC) generate targeted gene modifications with high efficiency but only those produced in reproductive cells are transmitted to the next generation. We report the design and characterization of a germ-line-specific Cas9 system (GSC) for Arabidopsis gene modification in male gametocytes, constructed using a SPOROCYTELESS (SPL) genomic expression cassette. Four loci in two endogenous genes were targeted by both systems for comparative analysis. Mutations generated by the GSC system were rare in T1 plants but were abundant (30%) in the T2 generation. The vast majority (70%) of the T2 mutant population generated using the UC system were chimeras while the newly developed GSC system produced only 29% chimeras, with 70% of the T2 mutants being heterozygous. Analysis of two loci in the T2 population showed that the abundance of heritable gene mutations was 37% higher in the GSC system compared to the UC system and the level of polymorphism of the mutations was also dramatically increased with the GSC system. Two additional systems based on germ-line-specific promoters (pDD45-GT and pLAT52-GT) were also tested, and one of them was capable of generating heritable homozygous T1 mutant plants. Our results suggest that future application of the described GSC system will facilitate the screening for targeted gene modifications, especially lethal mutations in the T2 population.

Indexed as

ArabidopsisBase SequenceChimeraClustered Regularly Interspaced Short Palindromic RepeatsCrosses, GeneticGenes, PlantGenetic EngineeringGenetic VectorsGenotyping TechniquesGerm CellsGerm Cells, PlantHybridization, GeneticInheritance PatternsMutagenesis, Site-DirectedMutationOrgan SpecificityArabidopsisCRISPR-Cas9gene modificationgerm-line-specific

Identifiers

PMID26360626
PMCPMC5515382
OpenAlexW2136656609

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.