Evidence map›Paper›PMID 26359499›Full record

ArticleThe Journal of biological chemistry2015

Structural and Functional Characterization of the JH2 Pseudokinase Domain of JAK Family Tyrosine Kinase 2 (TYK2).

Xiaoshan Min, Daniela Ungureanu, Sarah Maxwell, Henrik Hammarén, Steve Thibault, Ellin-Kristina Hillert, Merrill Ayres, Brad Greenfield, John Eksterowicz, Chris Gabel and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 99 citations in OpenAlex.

  1. Trial
  2. Modulating pseudokinase conformation from the ATP-binding site.Structure (London, England : 1993) · 2026
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  8. Structural basis for pseudokinase-mediated regulation of GCN2 in the integrated stress response.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Xiaoshan MinDepartments of Therapeutic Discovery, Amgen Inc., South San Francisco, California 94080.
Daniela Ungureanuthe Institute of Biomedical Technology, University of Tampere, 33014 Tampere, Finland.
Sarah MaxwellDepartments of Inflammation, Amgen Inc., South San Francisco, California 94080.
Henrik Hammarénthe School of Medicine, University of Tampere, 33014 Tampere, Finland.
Steve ThibaultDepartments of Therapeutic Discovery, Amgen Inc., South San Francisco, California 94080.
Ellin-Kristina Hillertthe Institute of Biomedical Technology, University of Tampere, 33014 Tampere, Finland.
Merrill AyresDepartments of Therapeutic Discovery, Amgen Inc., South San Francisco, California 94080.
Brad GreenfieldDepartments of Inflammation, Amgen Inc., South San Francisco, California 94080.
John EksterowiczDepartments of Therapeutic Discovery, Amgen Inc., South San Francisco, California 94080.
Chris GabelDepartments of Inflammation, Amgen Inc., South San Francisco, California 94080.
Nigel WalkerDepartments of Therapeutic Discovery, Amgen Inc., South San Francisco, California 94080.
Olli Silvennoinenthe School of Medicine, University of Tampere, 33014 Tampere, Finland; Department of Clinical Hematology, Tampere University Hospital, 33520 Tampere, Finland. Electronic address: olli.silvennoinen@uta.fi.
Zhulun WangDepartments of Therapeutic Discovery, Amgen Inc., South San Francisco, California 94080. Electronic address: zwang@amgen.com.
Amgen (United States) · USTampere University · FITampere University · FITampere University Hospital · FITampere University of Applied Sciences · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

JAK (Janus family of cytoplasmic tyrosine kinases) family tyrosine kinase 2 (TYK2) participates in signaling through cytokine receptors involved in immune responses and inflammation. JAKs are characterized by dual kinase domain: a tyrosine kinase domain (JH1) that is preceded by a pseudokinase domain (JH2). The majority of disease-associated mutations in JAKs map to JH2, demonstrating its central regulatory function. JH2s were considered catalytically inactive, but JAK2 JH2 was found to have low autoregulatory catalytic activity. Whether the other JAK JH2s share ATP binding and enzymatic activity has been unclear. Here we report the crystal structure of TYK2 JH2 in complex with adenosine 5'-O-(thiotriphosphate) (ATP-γS) and characterize its nucleotide binding by biochemical and biophysical methods. TYK2 JH2 did not show phosphotransfer activity, but it binds ATP and the nucleotide binding stabilizes the protein without inducing major conformational changes. Mutation of the JH2 ATP-binding pocket increased basal TYK2 phosphorylation and downstream signaling. The overall structural characteristics of TYK2 JH2 resemble JAK2 JH2, but distinct stabilizing molecular interactions around helix αAL in the activation loop provide a structural basis for differences in substrate access and catalytic activities among JAK family JH2s. The structural and biochemical data suggest that ATP binding is functionally important for both TYK2 and JAK2 JH2s, whereas the regulatory phosphorylation appears to be a unique property of JAK2. Finally, the co-crystal structure of TYK2 JH2 complexed with a small molecule inhibitor demonstrates that JH2 is accessible to ATP-competitive compounds, which offers novel approaches for targeting cytokine signaling as well as potential therapeutic applications.

Indexed as

Adenosine TriphosphateAmino Acid SequenceCrystallography, X-RayEnzyme ActivationEnzyme StabilityHumansJanus Kinase 1Janus Kinase 2Models, MolecularMolecular Sequence DataMutationPhosphorylationProtein ConformationProtein Structure, TertiarySequence Homology, Amino AcidStructural Homology, ProteinAdenosine TriphosphateJAK1 protein, humanJAK2 protein, humanJanus Kinase 1Janus Kinase 2TYK2 KinaseTYK2 protein, humanATP bindingcrystal structureJAK tyrosine kinaseJanus kinase (JAK)protein kinasepseudokinase domainstructural biologystructure-functionTYK2X-ray crystallography

Identifiers

PMID26359499
PMCPMC4646372
OpenAlexW2231320375

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.