Evidence map›Paper›PMID 26355565›Full record

ArticleGenes and immunity2015

Inflammatory bowel disease (IBD) locus 12: is glutathione peroxidase-1 (GPX1) the relevant gene?

F Häuser, H Rossmann, D Laubert-Reh, P S Wild, T Zeller, C Müller, S Neuwirth, S Blankenberg, K J Lackner

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Genes and immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

F HäuserInstitute of Clinical Chemistry and Laboratory Medicine, University Medical Center Mainz, Mainz, Germany.
H RossmannInstitute of Clinical Chemistry and Laboratory Medicine, University Medical Center Mainz, Mainz, Germany.
D Laubert-RehDepartment of Medicine II, Preventive Cardiology and Preventive Medicine, University Medical Center Mainz, Mainz, Germany.
P S WildDepartment of Medicine II, Preventive Cardiology and Preventive Medicine, University Medical Center Mainz, Mainz, Germany.
T ZellerDepartment of General and Interventional Cardiology, University Heart Center Hamburg, Hamburg, Germany.
C MüllerDepartment of General and Interventional Cardiology, University Heart Center Hamburg, Hamburg, Germany.
S NeuwirthInstitute of Clinical Chemistry and Laboratory Medicine, University Medical Center Mainz, Mainz, Germany.
S BlankenbergDepartment of General and Interventional Cardiology, University Heart Center Hamburg, Hamburg, Germany.
K J LacknerInstitute of Clinical Chemistry and Laboratory Medicine, University Medical Center Mainz, Mainz, Germany.
University Medical Center of the Johannes Gutenberg University Mainz · DEJohannes Gutenberg University Mainz · DEUniversität Hamburg · DEUniversity Medical Center Hamburg-Eppendorf · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-wide association studies have identified and repeatedly confirmed the association of rs3197999 in MST1 with inflammatory bowel disease (IBD). However, the underlying pathophysiology remains unclear. rs3197999 is a non-synonymous single-nucleotide polymorphism which modifies the function of macrophage stimulating protein-1 (MST1). We show by haplotyping that rs3197999 is in linkage disequilibrium with rs1050450 in GPX1, with almost complete cosegregation of the minor alleles. As shown by immunoassay, rs3197999 influences the MST-1 level in serum. But also rs1050450 causes an amino acid exchange in glutathione peroxidase 1 (GPx-1) and reduced activity of this antioxidant enzyme. The association of GPx deficiency and IBD in mice was already shown. We propose that GPx-1 is a better candidate than MST1 for the pathophysiologic link between IBD locus 12 and IBD.

Indexed as

Polymorphism, Single NucleotideAdultAgedAnimalsFemaleGlutathione PeroxidaseGlutathione Peroxidase GPX1Hepatocyte Growth FactorHumansInflammatory Bowel DiseasesLinkage DisequilibriumMaleMiceMiddle AgedProto-Oncogene ProteinsGlutathione PeroxidaseGlutathione Peroxidase GPX1Hepatocyte Growth Factormacrophage stimulating proteinProto-Oncogene Proteins

Identifiers

PMID26355565
OpenAlexW2468319056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.