Evidence map›Paper›PMID 26351699›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Peptide dimer structure in an Aβ(1-42) fibril visualized with cryo-EM.

Matthias Schmidt, Alexis Rohou, Keren Lasker, Jay K Yadav, Cordelia Schiene-Fischer, Marcus Fändrich, Nikolaus Grigorieff

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed.

  1. Review
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  6. Article
  7. An N-terminal acidic β-sheet domain is responsible for the metal-accumulation properties of amyloid-β protofibrils: a molecular dynamics study.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Structural polymorphism and cytotoxicity of brain-derived β-amyloid extracts.Protein science : a publication of the Protein Society · 2023
    Review
  13. Article
  14. Article
  15. Aβ and Tau Prions Causing Alzheimer's Disease.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Matthias SchmidtInstitute for Pharmaceutical Biotechnology, Ulm University, 89081 Ulm, Germany; Rosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, MA 02454-9110;
Alexis RohouRosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, MA 02454-9110; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147;
Keren LaskerDepartment of Developmental Biology, Stanford University School of Medicine, Stanford, CA 94305;
Jay K YadavInstitute for Pharmaceutical Biotechnology, Ulm University, 89081 Ulm, Germany;
Cordelia Schiene-FischerInstitute for Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, 06120 Halle (Saale), Germany.
Marcus FändrichInstitute for Pharmaceutical Biotechnology, Ulm University, 89081 Ulm, Germany; marcus.faendrich@uni-ulm.de niko@grigorieff.org.
Nikolaus GrigorieffRosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, MA 02454-9110; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147; marcus.faendrich@uni-ulm.de niko@grigorieff.org.

Funding

Single particle reconstructionP01GM062580 · NIGMS · HARVARD MEDICAL SCHOOL · PI LI, ZONGLI · 2001 to 2016
$23.7M
NIGMS NIH HHS 1 P01 GM-62580NIGMS NIH HHS P01 GM062580
6 · The paper itself

Abstract

Alzheimer's disease (AD) is a fatal neurodegenerative disorder in humans and the main cause of dementia in aging societies. The disease is characterized by the aberrant formation of β-amyloid (Aβ) peptide oligomers and fibrils. These structures may damage the brain and give rise to cerebral amyloid angiopathy, neuronal dysfunction, and cellular toxicity. Although the connection between AD and Aβ fibrillation is extensively documented, much is still unknown about the formation of these Aβ aggregates and their structures at the molecular level. Here, we combined electron cryomicroscopy, 3D reconstruction, and integrative structural modeling methods to determine the molecular architecture of a fibril formed by Aβ(1-42), a particularly pathogenic variant of Aβ peptide. Our model reveals that the individual layers of the Aβ fibril are formed by peptide dimers with face-to-face packing. The two peptides forming the dimer possess identical tilde-shaped conformations and interact with each other by packing of their hydrophobic C-terminal β-strands. The peptide C termini are located close to the main fibril axis, where they produce a hydrophobic core and are surrounded by the structurally more flexible and charged segments of the peptide N termini. The observed molecular architecture is compatible with the general chemical properties of Aβ peptide and provides a structural basis for various biological observations that illuminate the molecular underpinnings of AD. Moreover, the structure provides direct evidence for a steric zipper within a fibril formed by full-length Aβ peptide.

Indexed as

Cryoelectron MicroscopyProtein MultimerizationAmino Acid SequenceAmyloidAmyloid beta-PeptidesEpitope MappingImage Processing, Computer-AssistedImmunoglobulin Fab FragmentsModels, MolecularMolecular Sequence DataPeptide FragmentsPeptidesProtein Structure, SecondaryAmyloidAmyloid beta-Peptidesamyloid beta-protein (1-42)Immunoglobulin Fab FragmentsPeptide FragmentsPeptidescross-βFrealixprotein aggregationprotein folding

Identifiers

PMID26351699
PMCPMC4586870

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.