Evidence map›Paper›PMID 26351356›Full record

ArticleJournal of experimental botany2015

KNOTTED1-LIKE HOMEOBOX 3: a new regulator of symbiotic nodule development.

M Azarakhsh, A N Kirienko, V A Zhukov, M A Lebedeva, E A Dolgikh, L A Lutova

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Comparative analysis ofFrontiers in plant science · 2023
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  7. The PagKNAT2/6b-PagBOP1/2a Regulatory Module Controls Leaf Morphogenesis inInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Genome-Wide Identification of theFrontiers in plant science · 2020
    Article
  18. Review
  19. Article
  20. Plant physiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

M AzarakhshDepartment of Genetics and Biotechnology, St Petersburg State University, 199034, St Petersburg, Russia.
A N KirienkoAll-Russia Research Institute for Agricultural Microbiology (ARRIAM), 196608, St Petersburg, Russia.
V A ZhukovAll-Russia Research Institute for Agricultural Microbiology (ARRIAM), 196608, St Petersburg, Russia.
M A LebedevaDepartment of Genetics and Biotechnology, St Petersburg State University, 199034, St Petersburg, Russia mary_osipova@mail.ru dol2helen@yahoo.com.
E A DolgikhAll-Russia Research Institute for Agricultural Microbiology (ARRIAM), 196608, St Petersburg, Russia mary_osipova@mail.ru dol2helen@yahoo.com.
L A LutovaDepartment of Genetics and Biotechnology, St Petersburg State University, 199034, St Petersburg, Russia.
All-Russian Research Institute of Agricultural Microbiology · RUSt Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

KNOX transcription factors (TFs) regulate different aspects of plant development essentially through their effects on phytohormone metabolism. In particular, KNOX TF SHOOTMERISTEMLESS activates the cytokinin biosynthesis ISOPENTENYL TRANSFERASE (IPT) genes in the shoot apical meristem. However, the role of KNOX TFs in symbiotic nodule development and their possible effects on phytohormone metabolism during nodulation have not been studied to date. Cytokinin is a well-known regulator of nodule development, playing the key role in the regulation of cell division during nodule primordium formation. Recently, the activation of IPT genes was shown to take place during nodulation. Therefore, it was hypothesized that KNOX TFs may regulate nodule development and activate cytokinin biosynthesis upon nodulation. This study analysed the expression of different KNOX genes in Medicago truncatula Gaertn. and Pisum sativum L. Among them, the KNOX3 gene was upregulated in response to rhizobial inoculation in both species. pKNOX3::GUS activity was observed in developing nodule primordium. KNOX3 ectopic expression caused the formation of nodule-like structures on transgenic root without bacterial inoculation, a phenotype similar to one described previously for legumes with constitutive activation of the cytokinin receptor. Furthermore, in transgenic roots with MtKNOX3 knockdown, downregulation of A-type cytokinin response genes was found, as well as the MtIPT3 and LONELYGUY2 (MtLOG2) gene being involved in cytokinin activation. Taken together, these findings suggest that KNOX3 gene is involved in symbiotic nodule development and may regulate cytokinin biosynthesis/activation upon nodule development in legume plants.

Indexed as

Genes, HomeoboxGenes, PlantGenes, RegulatorCytokininsGene ExpressionGene Expression Regulation, PlantGlucuronidaseMedicago truncatulaPisum sativumReverse Transcriptase Polymerase Chain ReactionRhizobium leguminosarumRoot Nodules, PlantSymbiosisTranscription FactorsUp-RegulationCytokininsGlucuronidaseTranscription FactorsCytokininKNOX3KNOX transcription factorslegume–rhizobium symbiosisnodule developmentplant meristem.

Identifiers

PMID26351356
PMCPMC4765789
OpenAlexW2179915467

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.