Evidence map›Paper›PMID 26350502›Full record

ArticleCellular oncology (Dordrecht, Netherlands)2015

DNA methylation patterns in EBV-positive and EBV-negative Hodgkin lymphomas.

Myriam Ben Dhiab, Sonia Ziadi, Sarra Mestiri, Riadh Ben Gacem, Feryel Ksiaa, Mounir Trimeche

Abstract read
In one paragraph

Article in Cellular oncology (Dordrecht, Netherlands), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. MGMT-Methylation in Non-Neoplastic Diseases of the Central Nervous System.International journal of molecular sciences · 2021
    Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Aberrant gene promoter methylation of E-cadherin, p16Medical oncology (Northwood, London, England) · 2017
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. The Role of Gammaherpesviruses in Cancer Pathogenesis.Pathogens (Basel, Switzerland) · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Myriam Ben DhiabDepartment of Pathology, CHU Farhat-Hached, Sousse, Tunisia.
Sonia ZiadiDepartment of Pathology, CHU Farhat-Hached, Sousse, Tunisia.
Sarra MestiriDepartment of Pathology, CHU Farhat-Hached, Sousse, Tunisia.
Riadh Ben GacemDepartment of Pathology, CHU Farhat-Hached, Sousse, Tunisia.
Feryel KsiaaDepartment of Pathology, CHU Farhat-Hached, Sousse, Tunisia.
Mounir TrimecheDepartment of Pathology, CHU Farhat-Hached, Sousse, Tunisia. m_trimech@yahoo.fr.
Hôpital Farhat Hached · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeHodgkin lymphoma (HL) is characterized by the presence of Hodgkin and Reed-Sternberg cells. Epstein-Barr virus (EBV) infection is thought to play an important role in the development of HL. Although epigenetic alterations, such as aberrant DNA methylation, are known to contribute to the pathogenesis of various malignancies, little is known about such alterations in HL and their putative relationships with EBV infection.

methodsWe investigated promoter methylation patterns of seven tumor-associated genes in 53 primary HL cases using methylation-specific PCR (MS-PCR). Concomitantly, the EBV infection status was assessed using PCR, in situ hybridization and immunohistochemistry.

resultsThe gene promoter hypermethylation frequencies observed were 77.3 % for P16, 58.5 % for RASSF1A, 50.9 % for CDH1, 45.3 % for DAPK, 43.4 % for GSTP1, 37.7 % for SHP1 and 24.3 % for MGMT. SHP1 gene promoter hypermethylation was more frequently observed in patients at extreme ages (i.e., ≤ 15 and >54 years) than in adult patients (p = 0.006) and in patients with B symptoms (p = 0.03). Interestingly, most of the analyzed gene promoters were more frequently hypermethylated in EBV-negative than in EBV-positive cases, in particular the DAPK gene promoter (58 % versus 27 %, p = 0.04). Furthermore, hypermethylation of multiple gene promoters (≥ 3) was encountered more frequently in females than in males (86 % versus 57 %, p = 0.04), whereas EBV-positive cases were more common among males than females (55 % versus 30 %, p = 0.02).

conclusionsOur results indicate that epigenetic changes frequently occur in both EBV-positive and EBV-negative HL. The rates of these changes were found to vary according to clinico-pathological parameters. These observations probably reflect the multitude of factors involved in HL development and the complexity of their interactions with genetic and/or hormonal factors.

Indexed as

AdolescentAdultAgedChildDNA MethylationEpstein-Barr Virus InfectionsFemaleHodgkin DiseaseHumansImmunohistochemistryIn Situ HybridizationMaleMiddle AgedPolymerase Chain ReactionPromoter Regions, GeneticYoung AdultEpstein-Barr virusHodgkin lymphomaMethylation

Identifiers

PMID26350502
PMCPMC13004184
OpenAlexW1634084408

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.