Evidence map›Paper›PMID 26350294›Full record

ArticleProtein science : a publication of the Protein Society2015

Sequential unfolding of the hemolysin two-partner secretion domain from Proteus mirabilis.

Megan R Wimmer, Christopher N Woods, Kyle J Adamczak, Evan M Glasgow, Walter R P Novak, Daniel P Grilley, Todd M Weaver

Erratum issuedAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Pathogenesis ofEcoSal Plus · 2018
    Review
  3. Proteolysis of truncated hemolysin A yields a stable dimerization interface.Acta crystallographica. Section F, Structural biology communications · 2017
    Article
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Megan R WimmerDepartment of Chemistry and Biochemistry, University Wisconsin - La Crosse, La Crosse, Wisconsin, 54601.
Christopher N WoodsDepartment of Chemistry and Biochemistry, University Wisconsin - La Crosse, La Crosse, Wisconsin, 54601.
Kyle J AdamczakDepartment of Chemistry and Biochemistry, University Wisconsin - La Crosse, La Crosse, Wisconsin, 54601.
Evan M GlasgowDepartment of Chemistry and Biochemistry, University Wisconsin - La Crosse, La Crosse, Wisconsin, 54601.
Walter R P NovakDepartment of Chemistry, Wabash College, Crawfordsville, Indiana, 47933.
Daniel P GrilleyDepartment of Chemistry and Biochemistry, University Wisconsin - La Crosse, La Crosse, Wisconsin, 54601.
Todd M WeaverDepartment of Chemistry and Biochemistry, University Wisconsin - La Crosse, La Crosse, Wisconsin, 54601.

Funding

Asymmetric flow FFF and Composition Gradient/Light Scattering SystemS10RR023748 · NCRR · YALE UNIVERSITY · PI FOLTA-STOGNIEW, EWA JOANNA · 2007 to 2007
$271k
NCRR NIH HHS S10 RR023748
6 · The paper itself

Abstract

Protein secretion is a major contributor to Gram-negative bacterial virulence. Type Vb or two-partner secretion (TPS) pathways utilize a membrane bound β-barrel B component (TpsB) to translocate large and predominantly virulent exoproteins (TpsA) through a nucleotide independent mechanism. We focused our studies on a truncated TpsA member termed hemolysin A (HpmA265), a structurally and functionally characterized TPS domain from Proteus mirabilis. Contrary to the expectation that the TPS domain of HpmA265 would denature in a single cooperative transition, we found that the unfolding follows a sequential model with three distinct transitions linking four states. The solvent inaccessible core of HpmA265 can be divided into two different regions. The C-proximal region contains nonpolar residues and forms a prototypical hydrophobic core as found in globular proteins. The N-proximal region of the solvent inaccessible core, however, contains polar residues. To understand the contributions of the hydrophobic and polar interiors to overall TPS domain stability, we conducted unfolding studies on HpmA265 and site-specific mutants of HpmA265. By correlating the effect of individual site-specific mutations with the sequential unfolding results we were able to divide the HpmA265 TPS domain into polar core, nonpolar core, and C-terminal subdomains. Moreover, the unfolding studies provide quantitative evidence that the folding free energy for the polar core subdomain is more favorable than for the nonpolar core and C-terminal subdomains. This study implicates the hydrogen bonds shared among these conserved internal residues as a primary means for stabilizing the N-proximal polar core subdomain.

Indexed as

Amino Acid SequenceBacterial ProteinsHemolysin ProteinsModels, MolecularMolecular Sequence DataProtein Structure, TertiaryProtein UnfoldingProteus mirabilisSequence AlignmentBacterial ProteinsHemolysin Proteinsbeta-helixdomainprotein foldingsequential unfoldingsubdomaintwo-partner secretion

Identifiers

PMID26350294
PMCPMC4622217

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.