Evidence map›Paper›PMID 26350205›Full record

ArticleScientific reports2015

Rapid Bacterial Identification, Resistance, Virulence and Type Profiling using Selected Reaction Monitoring Mass Spectrometry.

Yannick Charretier, Olivier Dauwalder, Christine Franceschi, Elodie Degout-Charmette, Gilles Zambardi, Tiphaine Cecchini, Chloe Bardet, Xavier Lacoux, Philippe Dufour, Laurent Veron and 21 more

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Review
  3. Observational
  4. Proteomic assay for rapid characterisation of Staphylococcus aureus antimicrobial resistance mechanisms directly from blood cultures.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  5. Quick Detection ofSensors (Basel, Switzerland) · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Mass Spectrometry Proteotyping-Based Detection and Identification ofFrontiers in cellular and infection microbiology · 2021
    Article
  12. Article
  13. Review
  14. High-performance method to detection of Klebsiella pneumoniae Carbapenemase in Enterobacterales by LC-MS/MS.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  15. Article
  16. Review
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Yannick CharretierTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Olivier DauwalderCentre National de Référence des Staphylocoques, Centre de Biologie et de Pathologie Est, Hospices Civils de Lyon, Bron, France.
Christine FranceschiR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Elodie Degout-CharmetteTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Gilles ZambardiR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Tiphaine CecchiniTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Chloe BardetTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Xavier LacouxR&D ImmunoAssays, Marcy l'Etoile, bioMérieux SA, France.
Philippe DufourR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Laurent VeronTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Hervé RostaingTechnology Research Department, Innovation Unit, Grenoble, bioMérieux SA, France.
Veronique LanetTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Tanguy FortinTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Corinne BeaulieuTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Nadine PerrotR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Dominique DechaumeR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Sylvie PonsTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Victoria GirardR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Arnaud SalvadorUMR 5280, Institut des Sciences Analytiques, Université de Lyon, Lyon 1, 5 Rue de la Doua, 69100 Villeurbanne, France.
Géraldine DurandR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Frédéric MallardTechnology Research Department, Innovation Unit, Grenoble, bioMérieux SA, France.
Alain TheretzTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Patrick BroyerTechnology Research Department, Innovation Unit, Grenoble, bioMérieux SA, France.
Sonia ChatellierR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Gaspard GervasiTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.
Marc Van NuenenMicrobiology Unit, bioMérieux Inc. Durham, NC, USA.
Carolyn Ann RoitschCorporate IP Search and Watch, Intellectual Property, Marcy l'Etoile, bioMérieux SA, France.
Alex Van BelkumR&D Microbiologie, La Balme Les Grottes, bioMérieux SA, France.
Jérôme LemoineUMR 5280, Institut des Sciences Analytiques, Université de Lyon, Lyon 1, 5 Rue de la Doua, 69100 Villeurbanne, France.
François VandeneschCentre National de Référence des Staphylocoques, Centre de Biologie et de Pathologie Est, Hospices Civils de Lyon, Bron, France.
Jean-Philippe CharrierTechnology Research Department, Innovation Unit, Marcy l'Etoile, bioMérieux SA, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mass spectrometry (MS) in Selected Reaction Monitoring (SRM) mode is proposed for in-depth characterisation of microorganisms in a multiplexed analysis. Within 60-80 minutes, the SRM method performs microbial identification (I), antibiotic-resistance detection (R), virulence assessment (V) and it provides epidemiological typing information (T). This SRM application is illustrated by the analysis of the human pathogen Staphylococcus aureus, demonstrating its promise for rapid characterisation of bacteria from positive blood cultures of sepsis patients.

Indexed as

Bacterial Typing TechniquesBacteriaDrug Resistance, BacterialHumansMass SpectrometryReproducibility of ResultsStaphylococcal InfectionsStaphylococcus aureusVirulence

Identifiers

PMID26350205
PMCPMC4563557

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.