Evidence map›Paper›PMID 26348895›Full record

ArticleThe Journal of clinical investigation2015

Fluoromodule-based reporter/probes designed for in vivo fluorescence imaging.

Ming Zhang, Subhasish K Chakraborty, Padma Sampath, Juan J Rojas, Weizhou Hou, Saumya Saurabh, Steve H Thorne, Marcel P Bruchez, Alan S Waggoner

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Imaging of Extravasation of Splenocytes in the Dorsal Skinfold Window Chamber.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Vaccine-Induced Memory CD8Clinical cancer research : an official journal of the American Association for Cancer Research · 2019
    Article
  9. Review
  10. γ2 GABAFrontiers in cellular neuroscience · 2018
    Review
  11. Article
  12. Article
  13. Article
  14. Shedding light on biology of bacterial cells.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Review
  15. Article
  16. Article
  17. Local retention of antibodies in vivo with an injectable film embedded with a fluorogen-activating protein.Journal of controlled release : official journal of the Controlled Release Society · 2016
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ming Zhang
Subhasish K Chakraborty
Padma Sampath
Juan J Rojas
Weizhou Hou
Saumya Saurabh
Steve H Thorne
Marcel P Bruchez
Alan S Waggoner

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Jessie Nedrow · 1988 to 2026
$158.0M
Fluorescent Biosensors for Networks and PathwaysU54GM103529 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI WAGGONER, ALAN S. · 2012 to 2013
$6.3M
NCI NIH HHS P30 CA047904NCI NIH HHS P30CA047904NIGMS NIH HHS 5U54GM103529NIGMS NIH HHS U54 GM103529
6 · The paper itself

Abstract

Optical imaging of whole, living animals has proven to be a powerful tool in multiple areas of preclinical research and has allowed noninvasive monitoring of immune responses, tumor and pathogen growth, and treatment responses in longitudinal studies. However, fluorescence-based studies in animals are challenging because tissue absorbs and autofluoresces strongly in the visible light spectrum. These optical properties drive development and use of fluorescent labels that absorb and emit at longer wavelengths. Here, we present a far-red absorbing fluoromodule-based reporter/probe system and show that this system can be used for imaging in living mice. The probe we developed is a fluorogenic dye called SC1 that is dark in solution but highly fluorescent when bound to its cognate reporter, Mars1. The reporter/probe complex, or fluoromodule, produced peak emission near 730 nm. Mars1 was able to bind a variety of structurally similar probes that differ in color and membrane permeability. We demonstrated that a tool kit of multiple probes can be used to label extracellular and intracellular reporter-tagged receptor pools with 2 colors. Imaging studies may benefit from this far-red excited reporter/probe system, which features tight coupling between probe fluorescence and reporter binding and offers the option of using an expandable family of fluorogenic probes with a single reporter gene.

Indexed as

Genes, ReporterIntravital MicroscopyActivation, MetabolicAniline CompoundsAnimalsCell LineCell Membrane PermeabilityColorDeamino Arginine VasopressinEndocytosisFluorescenceFluorescent DyesGreen Fluorescent ProteinsHCT116 CellsHumansMiceAniline CompoundsAVPR2 protein, humanDeamino Arginine Vasopressinenhanced green fluorescent proteinFluorescent DyesGreen Fluorescent ProteinsN-(4-(1,3-bis(4-(dimethylamino)phenyl)allylidene)cyclohexa-2,5-dien-1-ylidene)-N-methylmethanaminiumReceptors, VasopressinRecombinant Fusion ProteinsSingle-Chain Antibodies

Identifiers

PMID26348895
PMCPMC4607111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.