Evidence map›Paper›PMID 26348689›Full record

ArticleNature communications2015

Defining the relationship between infection prevalence and clinical incidence of Plasmodium falciparum malaria.

Ewan Cameron, Katherine E Battle, Samir Bhatt, Daniel J Weiss, Donal Bisanzio, Bonnie Mappin, Ursula Dalrymple, Simon I Hay, David L Smith, Jamie T Griffin and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 4 pooled it
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 4 syntheses or guidelines pooled it, 95 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Ewan CameronDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.
Katherine E BattleDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.
Samir BhattDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.
Daniel J WeissDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.
Donal BisanzioDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.
Bonnie MappinDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.ORCID http://orcid.org/0000-0002-1205-719X
Ursula DalrympleDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.
Simon I HayWellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.ORCID http://orcid.org/0000-0002-0611-7272
David L SmithDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.ORCID http://orcid.org/0000-0003-4367-3849
Jamie T GriffinDepartment of Infectious Disease Epidemiology, MRC Centre for Outbreak Analysis and Modelling, Imperial College London, London W2 1PG, UK.
Edward A WengerInstitute for Disease Modeling, 1555 132nd Avenue NE, Bellevue, Washington 98005, USA.
Philip A EckhoffInstitute for Disease Modeling, 1555 132nd Avenue NE, Bellevue, Washington 98005, USA.
Thomas A SmithDepartment of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, University of Basel, Basel 4002, Switzerland.
Melissa A PennyDepartment of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, University of Basel, Basel 4002, Switzerland.
Peter W GethingDepartment of Zoology, Spatial Ecology and Epidemiology Group, University of Oxford, Tinbergen Building, Oxford OX1 3PS, UK.
Oxford Research Group · GBBellevue Hospital Center · USSwiss Tropical and Public Health Institute · CHImperial College London · GBNational Institutes of Health · US

Funding

Medical Research Council G1002284Medical Research Council K00669XMedical Research Council MR/K00669X/1Wellcome Trust 095066
6 · The paper itself

Abstract

In many countries health system data remain too weak to accurately enumerate Plasmodium falciparum malaria cases. In response, cartographic approaches have been developed that link maps of infection prevalence with mathematical relationships to predict the incidence rate of clinical malaria. Microsimulation (or 'agent-based') models represent a powerful new paradigm for defining such relationships; however, differences in model structure and calibration data mean that no consensus yet exists on the optimal form for use in disease-burden estimation. Here we develop a Bayesian statistical procedure combining functional regression-based model emulation with Markov Chain Monte Carlo sampling to calibrate three selected microsimulation models against a purpose-built data set of age-structured prevalence and incidence counts. This allows the generation of ensemble forecasts of the prevalence-incidence relationship stratified by age, transmission seasonality, treatment level and exposure history, from which we predict accelerating returns on investments in large-scale intervention campaigns as transmission and prevalence are progressively reduced.

Indexed as

Models, StatisticalAdolescentAdultAfricaAgedAged, 80 and overBayes TheoremChildChild, PreschoolComputer SimulationHumansIncidenceInfantInfant, NewbornMalaria, FalciparumMarkov Chains

Identifiers

PMID26348689
PMCPMC4569718
OpenAlexW1756832347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.