Evidence map›Paper›PMID 26348630›Full record

ArticleInvestigative ophthalmology & visual science2015

Proteomics Analysis of Molecular Risk Factors in the Ocular Hypertensive Human Retina.

Xiangjun Yang, Gözde Hondur, Ming Li, Jian Cai, Jon B Klein, Markus H Kuehn, Gülgün Tezel

Open access · bronzeAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The Role of Complement Dysregulation in Glaucoma.International journal of molecular sciences · 2024
    Review
  5. Article
  6. Article
  7. Mass spectrometry-based retina proteomics.Mass spectrometry reviews · 2023
    Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. The Potential Role of Nuclear Factor Erythroid 2-Related Factor 2 (Nrf2) in Glaucoma: A Review.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Xiangjun YangDepartment of Ophthalmology Columbia University College of Physicians and Surgeons, New York, New York, United States.
Gözde HondurDepartment of Ophthalmology Columbia University College of Physicians and Surgeons, New York, New York, United States.
Ming LiDepartment of Medicine, University of Louisville School of Medicine, Louisville, Kentucky, United States.
Jian CaiDepartment of Medicine, University of Louisville School of Medicine, Louisville, Kentucky, United States.
Jon B KleinDepartment of Medicine, University of Louisville School of Medicine, Louisville, Kentucky, United States 3Robley Rex Veterans Administration Medical Center, Louisville, Kentucky, United States.
Markus H KuehnDepartment of Ophthalmology & Visual Sciences, University of Iowa Carver College of Medicine, Iowa City, Iowa, United States.
Gülgün TezelDepartment of Ophthalmology Columbia University College of Physicians and Surgeons, New York, New York, United States.
Columbia University · USUniversity of Louisville · USLouisville VA Medical Center · USUniversity of Iowa · US

Funding

Unfolded Protein Response in Glaucoma PathogenesisR01EY022044 · NEI · UNIVERSITY OF IOWA · PI KUEHN, MARKUS H. · 2012 to 2014
$1.1M
Oxidative Stress in Neurodegeneration & Neuroprotection in GlaucomaR21EY024105 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TEZEL, GULGUN · 2015 to 2016
$419k
NEI NIH HHS 1R21EY024105NEI NIH HHS R01 EY022044NEI NIH HHS R21 EY024105
6 · The paper itself

Abstract

purposeTo better understand ocular hypertension-induced early molecular alterations that may determine the initiation of neurodegeneration in human glaucoma, this study analyzed retinal proteomic alterations in the ocular hypertensive human retina.

methodsRetina samples were obtained from six human donors with ocular hypertension (without glaucomatous injury) and six age- and sex-matched normotensive controls. Retinal proteins were analyzed by two-dimensional LC-MS/MS (liquid chromatography and linear ion trap mass spectrometry) using oxygen isotope labeling for relative quantification of protein expression. Proteomics data were validated by Western blot and immunohistochemical analyses of selected proteins.

resultsOut of over 2000 retinal proteins quantified, hundreds exhibited over 2-fold increased or decreased expression in ocular hypertensive samples relative to normotensive controls. Bioinformatics linked the proteomics datasets to various pathways important for maintenance of cellular homeostasis in the ocular hypertensive retina. Upregulated proteins included various heat shock proteins, ubiquitin proteasome pathway components, antioxidants, and DNA repair enzymes, while many proteins involved in mitochondrial oxidative phosphorylation exhibited downregulation in the ocular hypertensive retina. Despite the altered protein expression reflecting intrinsic adaptive/protective responses against mitochondrial energy failure, oxidative stress, and unfolded proteins, no alterations suggestive of an ongoing cell death process or neuroinflammation were detectable.

conclusionsThis study provides information about ocular hypertension-related molecular risk factors for glaucoma development. Molecular alterations detected in the ocular hypertensive human retina as opposed to previously detected alterations in human donor retinas with clinically manifest glaucoma suggest that proteome alterations determine the individual threshold to tolerate the ocular hypertension-induced tissue stress or convert to glaucomatous neurodegeneration when intrinsic adaptive/protective responses are overwhelmed.

Indexed as

Aged, 80 and overBlotting, WesternCase-Control StudiesChromatography, LiquidElectrophoresis, Gel, Two-DimensionalEye ProteinsFemaleHumansImmunohistochemistryIntraocular PressureMaleOcular HypertensionOxidative StressProteomicsRetinaRisk FactorsEye Proteins

Identifiers

PMID26348630
PMCPMC4566415
OpenAlexW2444256672

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.