Evidence map›Paper›PMID 26347754›Full record

ArticleFrontiers in plant science2015

Structural characterization of a mixed-linkage glucan deficient mutant reveals alteration in cellulose microfibril orientation in rice coleoptile mesophyll cell walls.

Andreia M Smith-Moritz, Zhao Hao, Susana G Fernández-Niño, Jonatan U Fangel, Yves Verhertbruggen, Hoi-Ying N Holman, William G T Willats, Pamela C Ronald, Henrik V Scheller, Joshua L Heazlewood and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Andreia M Smith-MoritzPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA USA.
Zhao HaoLawrence Berkeley National Laboratory, Berkeley Synchrotron Infrared Structural Biology Program, Berkeley, CA USA.
Susana G Fernández-NiñoPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA USA.
Jonatan U FangelDepartment of Plant and Environmental Sciences, University of Copenhagen, Copenhagen Denmark.
Yves VerhertbruggenPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA USA.
Hoi-Ying N HolmanLawrence Berkeley National Laboratory, Berkeley Synchrotron Infrared Structural Biology Program, Berkeley, CA USA.
William G T WillatsDepartment of Plant and Environmental Sciences, University of Copenhagen, Copenhagen Denmark.
Pamela C RonaldPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA USA ; Department of Plant Pathology, UC Davis Genome Center, University of California, Davis, Davis, CA USA.
Henrik V SchellerPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA USA.
Joshua L HeazlewoodPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA USA.
Miguel E Vega-SánchezPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA USA.
University of Copenhagen · DKJoint BioEnergy Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CELLULOSE SYNTHASE-LIKE F6 (CslF6) gene was previously shown to mediate the biosynthesis of mixed-linkage glucan (MLG), a cell wall polysaccharide that is hypothesized to be tightly associated with cellulose and also have a role in cell expansion in the primary cell wall of young seedlings in grass species. We have recently shown that loss-of-function cslf6 rice mutants do not accumulate MLG in most vegetative tissues. Despite the absence of a structurally important polymer, MLG, these mutants are unexpectedly viable and only show a moderate growth compromise compared to wild type. Therefore these mutants are ideal biological systems to test the current grass cell wall model. In order to gain a better understanding of the role of MLG in the primary wall, we performed in-depth compositional and structural analyses of the cell walls of 3 day-old rice seedlings using various biochemical and novel microspectroscopic approaches. We found that cellulose content as well as matrix polysaccharide composition was not significantly altered in the MLG deficient mutant. However, we observed a significant change in cellulose microfibril bundle organization in mesophyll cell walls of the cslf6 mutant. Using synchrotron source Fourier Transform Mid-Infrared (FTM-IR) Spectromicroscopy for high-resolution imaging, we determined that the bonds associated with cellulose and arabinoxylan, another major component of the primary cell walls of grasses, were in a lower energy configuration compared to wild type, suggesting a slightly weaker primary wall in MLG deficient mesophyll cells. Taken together, these results suggest that MLG may influence cellulose deposition in mesophyll cell walls without significantly affecting anisotropic growth thus challenging MLG importance in cell wall expansion.

Indexed as

celluloseFT-MIR spectroscopymixed-linkage glucanprimary cell wallricetype II cell walls

Identifiers

PMID26347754
PMCPMC4539472
OpenAlexW1660683767

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.