Evidence map›Paper›PMID 26347471›Full record

ArticleThe Journal of experimental medicine2015

Multicongenic fate mapping quantification of dynamics of thymus colonization.

Natalia Ziętara, Marcin Łyszkiewicz, Jacek Puchałka, Katrin Witzlau, Annika Reinhardt, Reinhold Förster, Oliver Pabst, Immo Prinz, Andreas Krueger

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Transcriptional network dynamics in early T cell development.The Journal of experimental medicine · 2024
    Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Cytokines, Transcription Factors, and the Initiation of T-Cell Development.Cold Spring Harbor perspectives in biology · 2018
    Review
  13. Review
  14. Article
  15. Article
  16. Lymphotoxin β Receptor Controls T Cell Progenitor Entry to the Thymus.Journal of immunology (Baltimore, Md. : 1950) · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Natalia ZiętaraInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany Krueger.Andreas@mh-hannover.de Natalia.Zietara@med.uni-muenchen.de.
Marcin ŁyszkiewiczInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany.
Jacek PuchałkaDr. von Haunersches Kinderspital, University Children's Hospital, Ludwig Maximilian University, D-80337 Munich, Germany.
Katrin WitzlauInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany.
Annika ReinhardtInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany.
Reinhold FörsterInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany.
Oliver PabstInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany Institute of Molecular Medicine, RWTH Aachen University, D-52074 Aachen, Germany.
Immo PrinzInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany.
Andreas KruegerInstitute of Immunology, Hannover Medical School, D-30625 Hannover, Germany Krueger.Andreas@mh-hannover.de Natalia.Zietara@med.uni-muenchen.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Postnatal T cell development depends on continuous colonization of the thymus by BM-derived T lineage progenitors. Both quantitative parameters and the mechanisms of thymus seeding remain poorly understood. Here, we determined the number of dedicated thymus-seeding progenitor niches (TSPNs) capable of supporting productive T cell development, turnover rates of niche occupancy, and feedback mechanisms. To this end, we established multicongenic fate mapping combined with mathematical modeling to quantitate individual events of thymus colonization. We applied this method to study thymus colonization in CCR7(-/-)CCR9(-/-) (DKO) mice, whose TSPNs are largely unoccupied. We showed that ∼160-200 TSPNs are present in the adult thymus and, on average, 10 of these TSPNs were open for recolonization at steady state. Preconditioning of wild-type mice revealed a similar number of TSPNs, indicating that preconditioning can generate space efficiently for transplanted T cell progenitors. To identify potential cellular feedback loops restricting thymus colonization, we performed serial transfer experiments. These experiments indicated that thymus seeding was directly restricted by the duration of niche occupancy rather than long-range effects, thus challenging current paradigms of thymus colonization.

Indexed as

AnimalsCell LineageMice, Inbred C57BLMice, KnockoutReceptors, CCRReceptors, CCR7Receptors, Interleukin-17Stem CellsThymocytesThymus GlandT-LymphocytesCC chemokine receptor 9Ccr7 protein, mouseIl17ra protein, mouseReceptors, CCRReceptors, CCR7Receptors, Interleukin-17

Identifiers

PMID26347471
PMCPMC4577840

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.