Evidence map›Paper›PMID 26347139›Full record

ArticleThe Journal of cell biology2015

TRIM-mediated precision autophagy targets cytoplasmic regulators of innate immunity.

Tomonori Kimura, Ashish Jain, Seong Won Choi, Michael A Mandell, Kate Schroder, Terje Johansen, Vojo Deretic

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 208 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
208citing papers in PubMed, 2 pooled it
17.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

208 citing papers in PubMed, 2 syntheses or guidelines pooled it, 320 citations in OpenAlex.

  1. Guideline
  2. Pooled it
  3. Article
  4. Review
  5. Review
  6. Article
  7. Ubiquitination-Related Diagnostic Biomarkers for Diabetic Nephropathy: Insights From Multiomic Analysis, Drug Docking, and Experimental Validation.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  8. Review
  9. Article
  10. Regulation of Innate Immune Signaling by Autophagy.International journal of molecular sciences · 2026
    Review
  11. Article
  12. TRIM21 is a molecular rheostat for influenza A virus replication.bioRxiv : the preprint server for biology · 2026
    Article
  13. Role of autophagy in antiviral innate immunity.Cellular & molecular biology letters · 2026
    Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. MacrophageAutophagy · 2025
    Article
  20. Article

148 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Tomonori Kimura
Ashish Jain
Seong Won Choi
Michael A Mandell
Kate Schroder
Terje Johansen
Vojo Deretic
University of New Mexico · USUiT The Arctic University of Norway · NOUniversity of Queensland · AU

Funding

UNM HSC Clinical and Translational Science CenterUL1TR001449 · NCATS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI CAMPEN, MATTHEW J, PANDHI, NANCY · 2015 to 2024
$36.9M
University of New Mexico Clinical and Translational Science CenterUL1TR000041 · NCATS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI LARSON, RICHARD S · 2012 to 2014
$9.8M
Autophagy Against Tuberculosis and HIVR01AI111935 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI DERETIC, VOJO P · 2014 to 2023
$7.0M
Pattern Recognition Receptors and Autophagy in Mtb Control in AIDSR01AI042999 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI DERETIC, VOJO P · 1998 to 2017
$6.6M
Pattern Recognition Receptors and Autophagy in Mtb Control in AIDSR37AI042999 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI VOJO P DERETIC · 2018 to 2026
$4.7M
NCATS NIH HHS UL1 TR000041NCATS NIH HHS UL1 TR001449NIAID NIH HHS AI042999NIAID NIH HHS AI111935NIAID NIH HHS R01 AI042999NIAID NIH HHS R01 AI111935NIAID NIH HHS R37 AI042999
6 · The paper itself

Abstract

The present paradigms of selective autophagy in mammalian cells cannot fully explain the specificity and selectivity of autophagic degradation. In this paper, we report that a subset of tripartite motif (TRIM) proteins act as specialized receptors for highly specific autophagy (precision autophagy) of key components of the inflammasome and type I interferon response systems. TRIM20 targets the inflammasome components, including NLRP3, NLRP1, and pro-caspase 1, for autophagic degradation, whereas TRIM21 targets IRF3. TRIM20 and TRIM21 directly bind their respective cargo and recruit autophagic machinery to execute degradation. The autophagic function of TRIM20 is affected by mutations associated with familial Mediterranean fever. These findings broaden the concept of TRIMs acting as autophagic receptor regulators executing precision autophagy of specific cytoplasmic targets. In the case of TRIM20 and TRIM21, precision autophagy controls the hub signaling machineries and key factors, inflammasome and type I interferon, directing cardinal innate immunity response systems in humans.

Indexed as

AutophagyImmunity, InnateAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsAutophagy-Related Protein-1 HomologAutophagy-Related Protein 8 FamilyBeclin-1CytoplasmCytoskeletal ProteinsHEK293 CellsHeLa CellsHumansInflammasomesInterferon-gammaInterferon Regulatory Factor-3Intracellular Signaling Peptides and ProteinsAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsAutophagy-Related Protein-1 HomologAutophagy-Related Protein 8 FamilyBeclin-1BECN1 protein, humanCytoskeletal ProteinsGABARAPL2 protein, humanInflammasomesInterferon-gammaInterferon Regulatory Factor-3Intracellular Signaling Peptides and ProteinsIRF3 protein, humanMEFV protein, humanMembrane ProteinsMicrofilament ProteinsProtein Serine-Threonine KinasesPyrinRibonucleoproteinsSS-A AntigenULK1 protein, human

Identifiers

PMID26347139
PMCPMC4576868
OpenAlexW2170423778

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.