Evidence map›Paper›PMID 26346778›Full record

ArticlePlant molecular biology2015

G-protein α-subunit (GPA1) regulates stress, nitrate and phosphate response, flavonoid biosynthesis, fruit/seed development and substantially shares GCR1 regulation in A. thaliana.

Navjyoti Chakraborty, Priyanka Sharma, Kostya Kanyuka, Ravi Ramesh Pathak, Devapriya Choudhury, Richard Hooley, Nandula Raghuram

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Article in Plant molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Is GCR1 the GPR157 of plants?Plant physiology · 2025
    Article
  4. Article
  5. Review
  6. Life, death and resurrection of plant GPCRs.Plant molecular biology · 2023
    Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Novel Aspects of Nitrate Regulation inFrontiers in plant science · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Navjyoti ChakrabortyUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16 C, Dwarka, New Delhi, 110078, India.
Priyanka SharmaUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16 C, Dwarka, New Delhi, 110078, India.
Kostya KanyukaDepartment of Plant Biology and Crop Science, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ, UK.
Ravi Ramesh PathakUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16 C, Dwarka, New Delhi, 110078, India.
Devapriya ChoudhurySchool of Biotechnology, Jawaharlal Nehru University, New Delhi, India.
Richard HooleyDepartment of Biology and Biochemistry, University of Bath, Claverton Down, Bath, BA2 7AY, UK.
Nandula RaghuramUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16 C, Dwarka, New Delhi, 110078, India. raghuram98@hotmail.com.
Guru Gobind Singh Indraprastha University · INJawaharlal Nehru University · INRothamsted Research · GBUniversity of Bath · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heterotrimeric G-proteins are implicated in several plant processes, but the mechanisms of signal-response coupling and the roles of G-protein coupled receptors in general and GCR1 in particular, remain poorly understood. We isolated a knock-out mutant of the Arabidopsis G-protein α subunit (gpa1-5) and analysed its transcriptome to understand the genomewide role of GPA1 and compared it with that of our similar analysis of a GCR1 mutant (Chakraborty et al. 2015, PLoS ONE 10(2):e0117819). We found 394 GPA1-regulated genes spanning 79 biological processes, including biotic and abiotic stresses, development, flavonoid biosynthesis, transcription factors, transporters and nitrate/phosphate responses. Many of them are either unknown or unclaimed explicitly in other published gpa1 mutant transcriptome analyses. A comparison of all known GPA1-regulated genes (including the above 394) with 350 GCR1-regulated genes revealed 114 common genes. This can be best explained by GCR1-GPA1 coupling, or by convergence of their independent signaling pathways. Though the common genes in our GPA1 and GCR1 mutant datasets constitute only 26% of the GPA1-regulated and 30% of the GCR1-responsive genes, they belong to nearly half of all the processes affected in both the mutants. Thus, GCR1 and GPA1 regulate not only some common genes, but also different genes belonging to the same processes to achieve similar outcomes. Overall, we validate some known and report many hitherto unknown roles of GPA1 in plants, including agronomically important ones such as biotic stress and nutrient response, and also provide compelling genetic evidence to revisit the role of GCR1 in G-protein signalling.

Indexed as

ArabidopsisArabidopsis ProteinsFlavonoidsFruitGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGene Knockout TechniquesGenes, PlantGTP-Binding Protein alpha SubunitsMutationNitratesPhosphatesPlants, Genetically ModifiedReceptors, G-Protein-CoupledSeedsArabidopsis ProteinsFlavonoidsGCR1 protein, ArabidopsisGPA1 protein, ArabidopsisGTP-Binding Protein alpha SubunitsNitratesPhosphatesReceptors, G-Protein-CoupledArabidopsis thalianaDevelopmentFlavonoidFunctional genomicsGCR1GPA1GPCRG-proteinGαMicroarrayNutrientStressTranscriptome

Identifiers

PMID26346778
OpenAlexW1652126870

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.