ArticleScientific reports2015
Friend or foe: differential responses of rice to invasion by mutualistic or pathogenic fungi revealed by RNAseq and metabolite profiling.
Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed, 46 citations in OpenAlex.
- Article
- Article
- Endophyte genomes support greater metabolic gene cluster diversity compared with non-endophytes in Trichoderma.PloS one · 2023Article
- Generalist endophyte Phomopsis liquidambaris colonization of Oryza sativa L. promotes plant growth under nitrogen starvation.Plant molecular biology · 2022Article
- Common gene expression patterns are observed in rice roots during associations with plant growth-promoting bacteria, Herbaspirillum seropedicae and Azospirillum brasilense.Scientific reports · 2022Article
- Plant SWEETs: from sugar transport to plant-pathogen interaction and more unexpected physiological roles.Plant physiology · 2021Review
- Proteomics and Metabolomics Studies on the Biotic Stress Responses of Rice: an Update.Rice (New York, N.Y.) · 2021Review
- Transcriptomic and Metabolomic Approaches Deepen Our Knowledge of Plant-Endophyte Interactions.Frontiers in plant science · 2021Review
- Biogeography and Ecology of Magnaporthales: A Case Study.Frontiers in microbiology · 2021Article
- Characteristic Volatile Fingerprints and Odor Activity Values in Different Citrus-Tea by HS-GC-IMS and HS-SPME-GC-MS.Molecules (Basel, Switzerland) · 2020Article
- Transcriptome analysis of different rice cultivars provides novel insights into the rice response to bacterial leaf streak infection.Functional & integrative genomics · 2020Article
- Host Transcriptional Response ofFrontiers in microbiology · 2020Article
- Disclosure of the Molecular Mechanism of Wheat Leaf Spot Disease Caused byInternational journal of molecular sciences · 2019Article
- Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae.Scientific reports · 2019Article
- Review
- Article
- Microbiome and ecotypic adaption of Holcus lanatus (L.) to extremes of its soil pH range, investigated through transcriptome sequencing.Microbiome · 2018Article
- Genome-wide comparative analysis of putative Pth11-related G protein-coupled receptors in fungi belonging to Pezizomycotina.BMC microbiology · 2017Article
- Transcriptome Analysis of Genes Involved in Dendrobine Biosynthesis in Dendrobium nobile Lindl. Infected with Mycorrhizal Fungus MF23 (Mycena sp.).Scientific reports · 2017Article
- Oak protein profile alterations upon root colonization by an ectomycorrhizal fungus.Mycorrhiza · 2017Article
Corrections and comments
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Authors and funding
13 authors at 5 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The rice endophyte Harpophora oryzae shares a common pathogenic ancestor with the rice blast fungus Magnaporthe oryzae. Direct comparison of the interactions between a single plant species and two closely-related (1) pathogenic and (2) mutualistic fungi species can improve our understanding of the evolution of the interactions between plants and fungi that lead to either mutualistic or pathogenic interactions. Differences in the metabolome and transcriptome of rice in response to challenge by H. or M. oryzae were investigated with GC-MS, RNA-seq, and qRT-PCR. Levels of metabolites of the shikimate and lignin biosynthesis pathways increased continuously in the M. oryzae-challenged rice roots (Mo-roots); these pathways were initially induced, but then suppressed, in the H. oryzae-challenged rice roots (Ho-roots). Compared to control samples, concentrations of sucrose and maltose were reduced in the Ho-roots and Mo-roots. The expression of most genes encoding enzymes involved in glycolysis and the TCA cycle were suppressed in the Ho-roots, but enhanced in the Mo-roots. The suppressed glycolysis in Ho-roots would result in the accumulation of glucose and fructose which was not detected in the Mo-roots. A novel co-evolution pattern of fungi-host interaction is proposed which highlights the importance of plant host in the evolution of fungal symbioses.
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