Evidence map›Paper›PMID 26344338›Full record

ArticleClinica chimica acta; international journal of clinical chemistry2015

Aptamer-based microchip electrophoresis assays for amplification detection of carcinoembryonic antigen.

Li Pan, Jingjin Zhao, Yong Huang, Shulin Zhao, Yi-Ming Liu

Abstract read
In one paragraph

Article in Clinica chimica acta; international journal of clinical chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Li PanKey Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources (Ministry of Education), College of Chemistry and Pharmacy, Guangxi Normal University, Guilin 541004, China; Department of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St., Jackson, MS 39217, USA.
Jingjin ZhaoKey Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources (Ministry of Education), College of Chemistry and Pharmacy, Guangxi Normal University, Guilin 541004, China.
Yong HuangKey Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources (Ministry of Education), College of Chemistry and Pharmacy, Guangxi Normal University, Guilin 541004, China.
Shulin ZhaoKey Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources (Ministry of Education), College of Chemistry and Pharmacy, Guangxi Normal University, Guilin 541004, China. Electronic address: zhaoshulin001@163.com.
Yi-Ming LiuDepartment of Chemistry and Biochemistry, Jackson State University, 1400 Lynch St., Jackson, MS 39217, USA. Electronic address: yiming.liu@jsums.edu.

Funding

Microfluidic mass spectrometry based fast chemical characterization of exosomesSC1GM089557 · NIGMS · JACKSON STATE UNIVERSITY · PI LIU, YIMING · 2010 to 2018
$1.4M
NIGMS NIH HHS GM089557NIGMS NIH HHS SC1 GM089557
6 · The paper itself

Abstract

backgroundCarcinoembryonic antigen (CEA) as one of the most widely used tumor markers is used in the clinical diagnosis of colorectal, pancreatic, gastric, and cervical carcinomas. We developed an aptamer-based microchip electrophoresis assay technique for assaying CEA in human serum for cancer diagnosis.

methodsThe magnetic beads (MBs) are employed as carriers of double strand DNA that is formed by an aptamer of the target and a complementary DNA of the aptamer. After the aptamer in the MB-dsDNA conjugate binds with the target, the complementary DNA was released from the MB-dsDNA conjugate. The released complementary DNA hybridizes with a fluorescein amidite (FAM) labeled DNA, and forms a DNA duplex, which triggers the selective cleavage of FAM labeled DNA by nicking endonuclease Nb.BbvCI, and generating a FAM labeled DNA segment. The released complementary DNA hybridizes with another FAM labeled DNA, resulting in a continuous cleavage of FAM labeled DNA, and the generation of large numbers of FAM labeled DNA segments. In MCE laser induced fluorescence detection (LIF), the FAM labeled DNA segment is separated and detected.

resultsThe linear range for CEA was 130 pg/ml-8.0 ng/ml with a correlation coefficient of 0.9916 and a detection limit of 68 pg/ml. The CEA concentration in the serum samples from healthy subjects was found to be in the range 1.3 ng/ml to 3.2 ng/ml. The CEA concentration in the samples from cancer patients was found to be >15 ng/ml.

conclusionsThis method may become a useful tool for rapid analysis of CEA and other tumor markers in biomedical analysis and clinical diagnosis.

Indexed as

Aptamers, NucleotideBlood Chemical AnalysisCarcinoembryonic AntigenElectrophoresis, MicrochipHumansMagnetsModels, MolecularNucleic Acid ConformationAptamers, NucleotideCarcinoembryonic AntigenAptamerCancerCarcinoembryonic antigenMicrochip electrophoresis

Identifiers

PMID26344338
PMCPMC4609300

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.